KEGG   Bombyx mandarina (wild silkworm): 114247291
Entry
114247291         CDS       T05882                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114247291
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bman03041]
    114247291
   04121 Ubiquitin system [BR:bman04121]
    114247291
Spliceosome [BR:bman03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    114247291
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    114247291
Ubiquitin system [BR:bman04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114247291
SSDB
Motif
Pfam: SART-1 HIND Crinkler
Other DBs
NCBI-GeneID: 114247291
NCBI-ProteinID: XP_028036021
UniProt: A0A6J2K1B2
LinkDB
Position
Unknown
AA seq 733 aa
MGSKKHKKEAKKKKHKSRSRSPLEGEERERKRHRKHKDRKRERSPDVQEVPVDSHQLKDD
ETNHSRGDSEDRDRRMRALHRPEKNESEGDKSVEYEREKTKSPVQTQSGGAQESLSIEET
NRLRAKLGLKPLEVNEKPADDGKFKDDLGEFYHKPATNITEQKKTEKLKEKIKERKEKRN
IEEKLQTTLLGEGSDDDDASAWVKRSRAIETQKKEAAKRAAMLDEMDAAFGVSALLPPRA
PPAPAPYRAPSLRGLRVAHQLDALEDERETILTLADKEILAEDPEDVLINVNIVDNERYK
KNVEERKKARAGYQAYDEEAELQASLGFRRSVLSKYDEQIQPDQLDKDKGFVIGDEASLD
AHRRRELLLAQGPASRRMESLALPQPQLAADYMDQHEIQAKFKKTKRKGKMRTKPKDEPI
DADTYDAAAAPLDTDDTDVRAGAAALVVDEEETEPDTELHAALARARRLRLKEVQDAAVP
KVEELLERVKEEQVEAGPEGMLFDATAEFCRTLGEAPAYFAKQNPHSPEHNPDMDVEEAA
SGAWSRVDVDSEKPADLKAGSGAGALAGEPALGAGVAGALRLALSKGYLQRAGAAPAPPA
AHSLAARHYSIEDKTYTDDDKHGRRERGYSGPLTDFREKSNFRPTVKLDYVDDDGRPLAP
KEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLGTLQMLQDKQRETRSP
YVLLSGAKRDAPH
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgggttcaaaaaagcataagaaagaagcaaagaaaaagaagcataagagtaggtcccgt
tcgccactcgaaggtgaagaacgtgaacgaaaaaggcataggaaacataaagatcgcaag
cgagagcgctcccctgacgttcaagaagtgcctgttgactcgcatcagctgaaggatgac
gagactaatcattctcgaggagacagtgaagatcgggatcgccgcatgcgcgccttgcat
cggccagagaaaaatgaatctgaaggggacaagagtgttgagtatgaacgtgagaaaaca
aagtctccagtacaaacacagagtggtggagcacaagagagcttgtccattgaagagacc
aatcgtctacgagctaaacttggacttaaaccacttgaagtcaatgagaaacctgctgat
gatggtaaattcaaagatgaccttggcgagttctaccataagccggctactaatatcact
gaacagaagaaaacagaaaaactcaaagagaaaataaaagagcggaaggagaagaggaat
attgaagagaaattacagactaccctactcggtgaagggtctgacgacgatgacgcgtca
gcctgggtgaagcgctccagagcaatagagacgcagaagaaagaagctgcaaaaagggcg
gccatgctggacgagatggacgcggcgttcggcgtgtccgccctgctgcccccccgcgcg
ccccccgcgcccgccccctaccgcgcgcccagcctgcgggggctgcgggtcgcgcaccag
ctcgatgcgttggaagatgaacgtgaaaccattctaacgttggctgataaagaaatatta
gctgaagacccagaggatgtgctcatcaatgtcaatattgttgacaacgagcgatacaag
aagaacgtggaagaacgcaagaaggcgcgcgccggctaccaggcttacgacgaggaggcc
gagctgcaggcctccctcggcttccgacgctccgtcctctccaagtacgacgagcagatc
cagcccgaccaactcgacaaggacaagggcttcgtcataggggacgaagcctctctcgac
gctcacaggcgcagagagctcttgctcgcgcaaggccccgcctctcgtcgcatggagtcg
cttgcgctgccgcagccgcagctcgcagccgactacatggaccagcacgagatccaagcc
aagttcaagaagactaagagaaagggcaagatgcggaccaagcccaaggacgagcccatc
gacgcggacacctacgacgccgccgccgcgccactcgacaccgacgacacagacgtgcgg
gcgggggccgcggcgctggtggtggacgaggaggagacggagcccgacaccgagctgcac
gccgcgctggccagggcgcgccgcctcaggctcaaggaggtgcaagatgccgctgtgcct
aaggtggaagaactcctggagcgcgtgaaggaggagcaggtggaggcggggccggagggt
atgctgttcgacgccaccgcagagttctgccggaccctcggggaagccccggcgtacttc
gccaaacagaacccgcactcgccggaacacaacccggacatggacgtggaggaagcggcc
tccggggcctggagcagggtggacgttgacagcgagaagccggccgaccttaaagcgggg
tctggcgcgggcgcgctggcgggcgagccggcgctgggcgcgggcgtggcgggcgcgctg
cggctggcgctgagcaagggctacctgcagcgcgcgggggccgcgccggcgccgcccgcc
gcgcactcgctggccgcgcgacactactccatcgaggacaagacctacacggacgacgac
aagcacgggcggcgggagcgcggctactcggggccgctcaccgacttcagggagaagagc
aacttccgcccgaccgtgaagttggactacgtggacgacgacgggcgtcccctcgcgccc
aaggaggccttccgctacctgtcgcacaagttccacgggaagggccccggcaagaacaag
caggagaagcgcatcaagaaggcggtgcaagaggggctaatgaagaagatgagctcgacg
gacactccgctgggcacgctgcagatgctgcaggacaagcagcgggagacgcgctcgccc
tacgtgctgctcagcggcgccaagcgtgacgcgccacactag

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