Bombyx mandarina (wild silkworm): 114247415
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Entry
114247415 CDS
T05882
Name
(RefSeq) THO complex subunit 6-like
KO
K13175
THO complex subunit 6
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114247415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114247415
03041 Spliceosome [BR:
bman03041
]
114247415
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114247415
Spliceosome [BR:
bman03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114247415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
Beta-prop_NOL10_N
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
PQQ
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_NWD2_C
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
114247415
NCBI-ProteinID:
XP_028036184
UniProt:
A0A6J2K7C7
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MLNKMLYNTVLSQTLSPCGKYLVAGNTYGDLAVFDLDRILNPVLELLSVEYNKPKHIHSI
DSKKQICSLVSTEKFLIIGTVNEICGWDWKAVVSVKLLKPVWSIKIPSQTFLDYNDVNCM
WLSQDSEKLYAGCGDNNVYVFNLEDGSLISTYKGHNNFIHSIHGKNQQIISAGEDGLVML
WDTRSGKSHNKLEPHTNNKVSRPDIGKWIGSAALGDDWIVCGGGPRLSLWHLRSLDAVTV
FDIPDNGIHVSFFHDDCVFAGGTSKHFYQMSYSGEVRVELPVSATTIYSAVLRTEYSTLL
SLAGSSPEIDLCTSLNYKDQVLHFR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaaatgttgtataacactgttttatctcagactttatcgccgtgtggtaaa
tatttagtggccggcaatacttatggagatcttgctgtatttgacctagatcgtatttta
aatccagtactagaattattatctgttgaatacaacaaaccaaaacatatacattctata
gattcaaaaaaacagatttgtagtctagtttcaacggaaaaattccttataattggtacc
gttaatgaaatatgcggatgggactggaaggctgttgtttctgttaaattattaaaacct
gtatggagcataaagattccttcccaaacttttttggactacaacgatgtgaactgcatg
tggctatctcaagacagtgagaagctgtatgctggttgtggagacaataatgtgtatgtg
tttaatttggaagatgggagccttatttcaacttataaggggcataataattttattcat
tctattcatggaaaaaaccaacagattatttcagcaggcgaagatggtttggttatgctt
tgggatactagaagtggaaaatcacacaataaattggaaccgcacactaataataaggtc
agtagacctgatattggcaagtggattggctcagcagctcttggagatgactggattgta
tgcggtggtggacctcgattgtctctgtggcaccttcgttcattagatgcagtgacagtc
tttgacattccagacaatgggattcatgtgtcattctttcatgatgactgtgtgtttgcc
ggtggtacttctaaacatttttaccaaatgagctactcgggtgaggtgagagtagaacta
ccagtgtctgccacgaccatatacagtgcggtactaagaactgaatacagcaccctgtta
agtttagccggttccagtccagaaatagatttgtgcacatctcttaattacaaagatcaa
gttttacattttcgatag
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