KEGG   Bombyx mandarina (wild silkworm): 114247415
Entry
114247415         CDS       T05882                                 
Name
(RefSeq) THO complex subunit 6-like
  KO
K13175  THO complex subunit 6
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114247415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bman03019]
    114247415
   03041 Spliceosome [BR:bman03041]
    114247415
Messenger RNA biogenesis [BR:bman03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     114247415
Spliceosome [BR:bman03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114247415
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_SCAP WD40_RFWD3 Beta-prop_SPT8 Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C PQQ Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_NWD2_C WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 114247415
NCBI-ProteinID: XP_028036184
UniProt: A0A6J2K7C7
LinkDB
Position
Unknown
AA seq 325 aa
MLNKMLYNTVLSQTLSPCGKYLVAGNTYGDLAVFDLDRILNPVLELLSVEYNKPKHIHSI
DSKKQICSLVSTEKFLIIGTVNEICGWDWKAVVSVKLLKPVWSIKIPSQTFLDYNDVNCM
WLSQDSEKLYAGCGDNNVYVFNLEDGSLISTYKGHNNFIHSIHGKNQQIISAGEDGLVML
WDTRSGKSHNKLEPHTNNKVSRPDIGKWIGSAALGDDWIVCGGGPRLSLWHLRSLDAVTV
FDIPDNGIHVSFFHDDCVFAGGTSKHFYQMSYSGEVRVELPVSATTIYSAVLRTEYSTLL
SLAGSSPEIDLCTSLNYKDQVLHFR
NT seq 978 nt   +upstreamnt  +downstreamnt
atgttgaataaaatgttgtataacactgttttatctcagactttatcgccgtgtggtaaa
tatttagtggccggcaatacttatggagatcttgctgtatttgacctagatcgtatttta
aatccagtactagaattattatctgttgaatacaacaaaccaaaacatatacattctata
gattcaaaaaaacagatttgtagtctagtttcaacggaaaaattccttataattggtacc
gttaatgaaatatgcggatgggactggaaggctgttgtttctgttaaattattaaaacct
gtatggagcataaagattccttcccaaacttttttggactacaacgatgtgaactgcatg
tggctatctcaagacagtgagaagctgtatgctggttgtggagacaataatgtgtatgtg
tttaatttggaagatgggagccttatttcaacttataaggggcataataattttattcat
tctattcatggaaaaaaccaacagattatttcagcaggcgaagatggtttggttatgctt
tgggatactagaagtggaaaatcacacaataaattggaaccgcacactaataataaggtc
agtagacctgatattggcaagtggattggctcagcagctcttggagatgactggattgta
tgcggtggtggacctcgattgtctctgtggcaccttcgttcattagatgcagtgacagtc
tttgacattccagacaatgggattcatgtgtcattctttcatgatgactgtgtgtttgcc
ggtggtacttctaaacatttttaccaaatgagctactcgggtgaggtgagagtagaacta
ccagtgtctgccacgaccatatacagtgcggtactaagaactgaatacagcaccctgtta
agtttagccggttccagtccagaaatagatttgtgcacatctcttaattacaaagatcaa
gttttacattttcgatag

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