Bombyx mandarina (wild silkworm): 114247448
Help
Entry
114247448 CDS
T05882
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bman01009
]
114247448
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114247448
04131 Membrane trafficking [BR:
bman04131
]
114247448
03036 Chromosome and associated proteins [BR:
bman03036
]
114247448
Enzymes [BR:
bman01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114247448
Protein phosphatases and associated proteins [BR:
bman01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114247448
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114247448
Membrane trafficking [BR:
bman04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
114247448
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
114247448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
114247448
NCBI-ProteinID:
XP_028036225
UniProt:
A0A6J2K2T9
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MATPPPTQSRRSGGDSKKVTPPTSNIVTRNGARKAKIQTRAMSAAAKPSASLIAAKKKAQ
QKKKQNHFVMEIRDHFQIAMESKTLVKGPTGFVTEPRMGEHRCLWDENYPECPERLISVI
TRCQELNLIQRCKHLEPRAATKEELCVLHAPSVYEMLETTHGNDDAAYLEELSSKFDAIY
IHPSTHELALISAGSTIDMVDSIVSGEVQNGAAFVRPPGHHAMHSEPCGYCFYNNVALAA
KHALDKRGLQRILIVDWDVHHGQATQQMFYDDPRVVYFSIHRYEHGSFWPQLRQSDFHYV
GSGAGKGYNFNVPLNKTGMKDGDYLAIWHQLLLPMAYEYQPELIIVSAGYDAAIGCPEGE
MEVSPACYAVLLHALQSVTARVCVVLEGGYCLTSLAEGAALTLRTLLGDAPPKLEPPTPP
CDSIRDTILDCIYAHRQYWSCYSYQPARGGRHEVLVRWRGDETRPSRFATRDCYPTQDES
TRRALEDRLDHLRAVTDLTSPTHAVGYVYDEAMLKHRNVVEPGHVESPERIMRIHERHRD
FGLLERLHRLPGRAASDQEILSVHSDKYLDRLKELASTKLRDLNNQKEEYDSVYFHPESL
SSAAVAAGCVLQAVEAVVSGQCGAAACVVRPPGHHADRAAPAGFCLLNNAALAARAALSP
RTSPRTRRVLLLDWDVHHGNGTQALTYSDDQILYISIHRYDHGSFFPHSKDADYTAVGTG
RGEGYNVNIPWNKRGMGDAEYMAAFTQVVLPIAHEYNPDLVIVSAGFDACVGDPLGGCKV
TPECYGRMTQLLRGLAGGRVVLCLEGGYNTTAISYAMTMCTKALLGDPILHHYEPRTACH
WSAVETINNVISTHKKYWKSLAFQLALPSEDVLQRPAPSRGLSDLSDALSSSYEDTKSDS
KSDSQLDTSLEHNMANLSLNKCGDGVHCGTDDEDDAGNTASNSNPESTGNTKSLVDYLSE
NMQALVEGEMFAVVPLGWCPHLEALYAIPAGVRFQQGLQCVDCEHTLENWVCLHCYITAC
ARGVNAHMQAHWAASGHALVLSLRDLSVWCCACDAYVDHPLLYDAKNNAHRCKFGEDMPW
CYAADAVEMH
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggctacacctccgccgacgcagtctcgtagatcgggcggtgacagtaagaaagtaacg
ccgccaacgtccaatatagtgaccaggaatggggctcgcaaggccaagattcaaactcga
gcaatgtccgccgcagctaagccttcagcatccttaatagcagctaaaaagaaggctcaa
cagaaaaagaagcaaaatcatttcgtaatggagatcagggatcattttcagattgcgatg
gaatcgaagacattagtgaagggtccaaccggatttgtcactgagcctcgcatgggagaa
cacaggtgcttgtgggacgaaaattacccagaatgtccggaaaggctcattagtgtcatc
acgaggtgtcaggaactgaacctgatccagcgctgcaagcacttggagccccgcgcggcc
accaaggaggagctctgcgtgctacacgcgccctccgtgtacgaaatgttagagacgaca
cacggaaacgacgacgccgcgtatctggaagagctctcatcgaaattcgacgctatttat
attcatccgagcacgcacgagttggcgctgatatcggccggctcgaccatcgacatggtg
gacagcatagtgtcgggtgaagtccagaacggcgcggctttcgtgcggccgccggggcac
cacgccatgcactcggagccctgcggctactgcttctacaacaacgtcgctttggccgcc
aagcacgccttggacaaaaggggtctgcaaaggatactgatcgtggactgggacgttcac
cacggacaagccacacagcagatgttctacgacgatcccagagtggtatacttctcgata
caccgctacgagcacggctcgttctggccccagctgcgacagtccgacttccactacgtc
ggcagcggcgcgggtaaaggatacaatttcaatgtgcccctcaacaaaaccgggatgaaa
gacggagactatttggccatctggcaccagctgcttctgcccatggcctacgagtaccag
ccggagttgatcatagtatctgcaggatacgacgcggccatcggatgtcccgagggagag
atggaggtgagtccggcgtgctacgcggtcctgctgcacgcgctgcagtcggtgacggcg
cgcgtgtgcgtggtgctggagggcggctactgcctgacgtcactggccgagggggccgcc
ctcacgctgcggacgctgctgggcgacgcgccccccaaactggagccccctacgcccccc
tgcgactcaatccgcgacacgatactggactgcatatacgcgcacagacagtactggagc
tgctacagctaccagcccgcgcgggggggccgccacgaggtgctcgtgcggtggcgcggc
gacgagacgcgcccgtcgcgcttcgccacccgggactgctacccgacgcaggacgagtcc
acccgccgggctctggaggacagactcgaccacttgcgagcggtgacggatctgacgtca
ccgacccacgcggtcggctacgtgtacgacgaggcgatgttgaagcacaggaacgtggtc
gaaccaggccacgtcgaaagtccggagcgtatcatgaggatccacgagcgacatcgggac
ttcggtctgctggagcggctgcaccggctgcccggccgcgccgcctccgaccaggagata
ctgagcgtgcactccgacaaatatttggacaggttaaaggagctggcgtcgacgaagttg
cgggacctgaataaccagaaggaggagtacgactctgtgtactttcacccggagtcgctg
tccagcgctgctgtggcggccggctgcgtgctgcaggcggtggaggcggtggtgtcgggg
cagtgcggcgccgccgcgtgcgtggtgcgcccgcccggacaccacgccgaccgcgccgcg
cccgccggcttctgtctgctcaacaacgccgcgctggccgcccgcgccgccctctccccc
cgcacctccccccgcacccgccgcgtgctgctgctcgactgggacgtgcaccacgggaac
ggcacgcaggcgctcacttacagcgacgaccagatactgtacatatcgatacatcgttac
gaccacggctcgttcttcccgcactcgaaggacgcagactacacggccgtgggcacgggg
cggggtgagggctacaatgtcaacataccttggaataagcgcggcatgggtgacgcggag
tacatggccgccttcacccaggtcgtgctgccgatagctcacgagtacaatccggacctg
gtgatcgtgtctgcgggcttcgacgcctgcgtcggggacccactgggaggttgtaaagta
actccggagtgctacggccgcatgacgcagctgctgcgagggctcgccggaggtcgggtg
gtgctctgcctggagggcggctacaacacgaccgccatctcctacgccatgaccatgtgc
accaaggccctgctgggagaccccatactgcaccactacgaaccgaggaccgcctgccac
tggtccgccgtcgagaccataaacaacgtcatcagcacgcacaagaagtactggaagagc
ctcgccttccaactcgctctgccgtctgaggacgtgctccagcggccggcgccgtcgcga
ggcctgtccgacctgtccgacgcgctgtcgtcttcatacgaggacaccaagtcggactcc
aagagcgacagtcaactggacacgtccctggagcacaacatggccaacctcagtctgaac
aagtgcggagacggcgtgcactgcggcactgacgacgaggacgacgccggcaacaccgcg
tccaattctaatccggaatcgactggcaataccaagagtttagtggattacttgtcggag
aacatgcaggcgctcgtggagggcgagatgttcgccgtggtgccgctgggctggtgcccg
cacctggaggcgctgtacgccatccccgccggggtccgcttccagcagggactccagtgc
gtcgactgcgaacacaccctggagaactgggtgtgtctgcactgctatattacggcgtgc
gcgcgcggcgtgaacgctcacatgcaggcgcactgggcggccagcgggcacgcgctggtg
ctgtccctgcgcgacctgtccgtgtggtgctgcgcgtgcgacgcctacgtggaccacccg
ctgctctacgacgccaagaacaacgcgcaccgctgcaagttcggcgaggacatgccgtgg
tgctacgccgcagacgccgtagagatgcactag
DBGET
integrated database retrieval system
