KEGG   Bombyx mandarina (wild silkworm): 114247467
Entry
114247467         CDS       T05882                                 
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03420  Nucleotide excision repair
bman04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    114247467
  09124 Replication and repair
   03420 Nucleotide excision repair
    114247467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bman04121]
    114247467
   03400 DNA repair and recombination proteins [BR:bman03400]
    114247467
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bman04147]
    114247467
Ubiquitin system [BR:bman04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     114247467
DNA repair and recombination proteins [BR:bman03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      114247467
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      114247467
Exosome [BR:bman04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   114247467
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW Cas_Cas5d DUF2018
Other DBs
NCBI-GeneID: 114247467
NCBI-ProteinID: XP_028036248
UniProt: A0A6J2K3L3
LinkDB
Position
Unknown
AA seq 751 aa
MSGLAETPISAKEGGNLYKKRSLPVSESCSKRVKINEMSAEEKISNFSLVNPNSNGIKMS
STSMNKPGVTAKKLIIKNFKSKPNLPDNYQETTWSKLREAVVAIQTSKSIAYSLEELYQA
VENMCSHKMASQLYVNLTNLVEAHVKANIEQFLSESMDRQVFLKRMDDCWRAHCRQMIMI
RSIFLYLDRTYVLQNPSIHSIWDMGLDLFRHHIAMNTLVQTRTVDGLLLLIERERGGDSV
DISLLKSLLRMLSDLQIYQEAFEHKFLQATERLYAAEGQRLMRELAVPEYLAHVEKRLKE
ENDRLLHYLDPSTKWQLVVVVERQLLGEHVAGILGKGLAALLDAPRLHDLATLYTLFSRV
KDGLAELCHHFNGYIKKKGRTIVIEPERDKTMVTELLDFKEQLDHVVNTCFQRNDKFIYS
MREAFEFFINQRQNKPAELIAKFVDLKLRAGNKEATEEELERLLDKIMVLFRFIHGKDVF
EAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGGFTCKLEGMFKDMELSKDINITYK
QVNGTDSRYRIIGEFSMSYYILLLYKYYITQRMVAFGNKELQVSLFQALVLLLFNDGDNL
SFEDIKVSTNIEEGELRRTLQSLACGKARVLSKAPRGRDVQDLDHFSFNADFTNKLFRIK
INQIQMKETSEEQKATEERVFQDRQYQIDAAIVRVMKMRKALSHNLLISELYNQLKFPVK
PSDLKKRIESLIDRDYMERDKDNPNQYNYVA
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgtcgggattagctgaaactcctatttctgccaaagaaggcggtaatctgtataaaaaa
cgatcactgcctgtcagcgaatcgtgtagcaaaagagtgaaaatcaacgaaatgagcgca
gaggagaaaatatcaaatttttcgctagtgaatccaaattctaacgggataaagatgtcg
tcaacatcaatgaacaagcctggcgttactgcaaaaaagctgataattaagaatttcaaa
agtaaaccgaaccttccagacaattatcaggaaacgacatggagcaagctgcgggaagct
gttgtcgccattcagacctcaaaatcgatagcctattccttagaagaattatatcaagcc
gtcgaaaacatgtgtagtcataagatggcttcacaactttatgttaacttaacaaacttg
gtagaagctcatgtgaaagccaacattgagcagttcttgtccgagagcatggacagacag
gtctttctaaagaggatggacgactgctggcgagctcactgcagacaaatgattatgatt
agaagcatttttttatatttagaccgaacctatgtccttcaaaaccctagtatacattca
atttgggacatgggcctagacctgtttcgtcaccatatagcaatgaatacacttgtccag
actcgtacagtagatggcctcttattacttattgaacgtgagcgaggaggtgattcagta
gatatatctttgctgaagagtcttctacgtatgctctctgatctacaaatatatcaggaa
gcatttgagcataaattccttcaagcaactgaaaggctgtacgctgcagaaggacaacgt
ttgatgagggaactggcagttcctgaataccttgcccacgtagagaaaagacttaaagag
gagaatgatcgccttttacattatttagacccatcaaccaaatggcaactggtggtggtg
gtagagcgacagttgctgggtgaacatgtggccgggatactcggtaagggcctggctgca
ttgttggacgcaccacgactacatgacctggccacactctacacgctgttctccagggtt
aaggatggcctggctgaactttgtcatcatttcaatggttacatcaagaaaaagggaaga
acgatagtaatagagccagagcgagacaagacgatggtaactgagctactcgacttcaaa
gaacaactggaccatgtagtcaacacatgcttccagagaaatgacaaattcatatactct
atgagagaagcctttgaattctttattaatcagagacagaacaaacctgctgaattaatt
gccaaatttgtggatctaaaattgagggccggtaataaagaagcaactgaagaagaatta
gaacgtctgctagacaagataatggttttgttccgtttcatacacggcaaggatgttttt
gaagctttctataaaaaggatctagcaaagagattgctagtaggtaaatctgcatcggtg
gacgctgagaagtcgatgcttagtaaactgaagcaagagtgcggaggtggcttcacctgt
aaactagaaggaatgttcaaagatatggagctatctaaagatatcaatattacatataag
caggtaaatggcactgattctcggtacaggattatcggagaatttagtatgtcctactat
atactactgctatacaaatactacattacacaaaggatggttgcctttggtaacaaagag
ctacaggtttcgttattccaagctctggtcctgttattgttcaacgatggagacaatctc
tcttttgaagacattaaggtttccaccaatatagaggagggagagctccgccgcacgctg
cagtccctggcgtgcgggaaggcgcgcgtgctgagcaaggcgccgcgcggtcgggacgtg
caggacctcgaccacttctccttcaatgcggacttcaccaacaagctgttccggatcaaa
atcaaccagatacagatgaaggagacgagcgaggagcagaaggcgacggaagagcgcgtg
ttccaagacaggcagtaccagatcgacgcggccatcgtccgggtcatgaagatgaggaaa
gcgctctcgcacaacctcctcatatccgaactgtacaaccagctcaagtttccggttaag
ccctccgatctaaagaagcgcatagagtccctgatcgaccgcgactacatggagcgcgac
aaggacaacccgaaccaatacaactacgtggcgtaa

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