Bombyx mandarina (wild silkworm): 114247499
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Entry
114247499 CDS
T05882
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114247499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114247499
03009 Ribosome biogenesis [BR:
bman03009
]
114247499
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114247499
Spliceosome [BR:
bman03041
]
Complex A
U1 snRNP components
U1 related factors
114247499
Complex B
114247499
Ribosome biogenesis [BR:
bman03009
]
Eukaryotic type
Pre-60S particles
Helicases
114247499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
P-loop_SecA
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
114247499
NCBI-ProteinID:
XP_028036285
UniProt:
A0A6J2K2Z2
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MSGNWNNSRGNGGSKFGGGNKFGDNSSRFGNGGNRFGGSGGFGGKKEFSGGQNMRRPDWD
SVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQ
GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG
PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR
LIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK
KLAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTI
IFVETKRKAENISRNIRRYGWPAVCMHGDKTQQERDEVLYQFKEGRASILVATDVAARGL
DVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQ
IISPQLQSMADRCGGGGGGWNRNRFGGGGRGGGGSFKRGSNFGKSSQRGGGSGYKRFDDY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtaactggaataatagccgtggaaacggtggttccaaatttggaggaggcaac
aaattcggcgataattcgtctcgatttggcaacggtggcaatagatttggaggatctgga
ggatttggtgggaaaaaagaattctctggaggtcagaacatgcgtcgcccagattgggat
tctgtttcactccaacctttcaacaaaaacttttatgatccacatcctacagttctcaaa
agatcaccatatgaagtcgaagagtacagaaataatcacgaggtaactgtaagtggcgtt
gaggttcataatcctattcaatactttgaagaagcaaattttcctgattatgtgcaacaa
ggtgtgaagacaatgggttacaaagaaccgacgcccattcaagctcaaggctggccgata
gctatgtctggaaagaatttagttggcgtagctcaaacgggttccggcaaaacgttggcc
tacatcttgccagccattgtgcacataaacaaccaaccgcctattcggagaggtgatggt
ccgattgctttggtcttggcgcctaccagagagttagcacaacaaattcagcaagttgct
gcagattttggacacacatcttatgttcgtaacacgtgtgtgtttggtggtgctcctaaa
agagagcaagcccgggacttggagaggggagtagaaatagtcattgctactccaggtaga
ttaattgatttcttggaaaagggcacaaccaacttacagcggtgcacatatttagttctt
gatgaggctgatcgtatgttggatatgggatttgaaccacaaatcagaaaaatcattgag
caaatacgcccagacagacagactttgatgtggtcagctacttggcccaaagaagtgaag
aaacttgctgaggattacttgggagattacattcagatcaatataggatcattacaactt
tccgcaaatcacaacattcttcaaattgtagatatttgtcaagaacatgaaaaagaaaac
aaattaaatgtattattgcaagaaattggacaaagtcaagaacctggtgcgaaaacaata
atttttgttgaaaccaagagaaaagctgagaacatatcaaggaacataaggagatatggc
tggccagctgtttgcatgcatggcgataaaactcaacaagaaagagatgaagttctgtat
cagttcaaggaaggtcgtgctagtattcttgtagcaactgatgttgcagctcgagggctt
gatgttgatggtatcaaatatgtaataaattttgattatccaaattcgtcggaggattac
atccatcgtattgggagaactggacgttcaaaatcaaaaggaacatcatatgctttcttt
accccttcaaattcccgtcaagccaaagatttggtatctgttctacaagaagctaatcag
attattagcccacaactgcagtcgatggccgaccgttgcggtggtggtggcggcgggtgg
aacaggaacagattcggcggaggtggacgaggtggtggcggctcttttaaacgcggaagc
aattttggcaagagtagccaaagggggggcggcagtggttacaaacgatttgacgactat
taa
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