Bombyx mandarina (wild silkworm): 114247532
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Entry
114247532 CDS
T05882
Name
(RefSeq) ATP-dependent RNA helicase DBP2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114247532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114247532
03009 Ribosome biogenesis [BR:
bman03009
]
114247532
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114247532
Spliceosome [BR:
bman03041
]
Complex A
U1 snRNP components
U1 related factors
114247532
Complex B
114247532
Ribosome biogenesis [BR:
bman03009
]
Eukaryotic type
Pre-60S particles
Helicases
114247532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SecA_DEAD
AAA_30
Cas3-like_C_2
GNAT_acetyltr_2
PhoH
Motif
Other DBs
NCBI-GeneID:
114247532
NCBI-ProteinID:
XP_028036320
UniProt:
A0A6J2K328
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MALNVLTRLLKRKELSKLLPYKRQILETNVFHTHIIPKVQYSILHNQILKGTKLREIQSL
RFYSVKTEQKKEDDDYRSDNSITVIGQDIPSPFVDIEASGFPEYIKTFLKMQGITKPTVI
QSQGWPIALSGKNFVGIAQTGTGKTLAFLLPAVVHIKENKAKKGRGPIVLVLAPTRELAR
QIEQVAQDFNEQLGIRCACIYGGANRSKQAAQLQAGVDIVIATPGRLNDFLITKTTTLSR
CTYVVLDEADRMLDMGFEPQIRQALEGVPLERQILMFSATWPKEVRTLAKDYLGEFVQVN
VGSTELSANRNIQQIVHVCEQDEKAEKFTEIMHKISGLGFGKTLVFTNTKKSVDYLERVL
RGNGWPALGIHGDRTQLQRDMIINKFKTGKTNILVATDVAARGLDVDGVTHVVNYDYPNT
SEDYIHRIGRTGRQDNKGISHSILTEENARQAKDLIEVLKEAKQDIPQELYDLARSFDIT
KSTEKFYKKKSFQKPYNFSNNASKRWNRFRNDRYY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaatgtgctcacaaggttattaaaacgaaaggagttgtccaaattattacct
tacaaacgacaaatactagaaacaaatgtatttcacactcacattattcccaaggttcaa
tattcaatattgcacaatcaaatattaaaaggtacaaaactacgagagatacaaagctta
agattttattctgtaaaaactgagcagaaaaaggaagatgatgattacagaagcgataat
agcattactgttattggtcaagatatacccagtccttttgttgacatagaagccagtgga
tttcctgaatatataaaaacatttttgaagatgcaaggtatcacaaaaccaactgtgata
cagtcacagggatggccaatagctttgagtggtaaaaactttgtgggtatagcacaaaca
ggtaccggaaaaacattggcttttcttttaccagctgttgttcatattaaagaaaataaa
gcaaaaaaggggcgaggaccaattgttctggttcttgccccaaccagggaattggcaaga
caaatagagcaggtggcacaggattttaatgagcaattaggtatacgttgtgcttgtatt
tacggtggagcaaatagaagtaaacaagcagcacagttacaagctggagttgacatagta
attgcaactccaggaagactgaatgattttcttattactaagacaacaacattaagcagg
tgtacatatgtggtgctagatgaagcggaccgaatgctggatatgggttttgaacctcag
atacgtcaagctttagaaggagtaccactagagaggcaaatcctgatgttctcagcaaca
tggccaaaggaagtccgcactcttgcaaaagattatttaggtgaatttgtccaggtcaat
gttggttctactgagttgtctgccaaccgcaacatacaacaaattgtccatgtatgtgaa
caagacgaaaaagccgagaagtttacagagataatgcataaaatatctggtttaggtttt
ggtaaaacattagtatttacaaacactaagaaatctgtggactatcttgagagagtgctt
cggggaaatggatggccagctctaggtattcatggggatagaacacaactccagagagat
atgatcatcaacaaatttaaaactggaaagactaatattctagtagctacagatgttgca
gctagaggtcttgatgttgatggagtgacacacgtagtaaactatgactatcccaataca
tctgaagattatattcacagaataggtaggacagggcgtcaagataacaagggcatatct
cattctatactcactgaagaaaatgcaagacaggcaaaggatttaatagaagttttgaaa
gaagctaaacaggatatcccccaagaattgtatgacttggctcgctcgtttgacatcacg
aaatccactgaaaaattttacaaaaagaaaagcttccagaagccgtacaattttagtaat
aatgcgagtaaaagatggaacagatttagaaatgatagatattactaa
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