Bombyx mandarina (wild silkworm): 114247839
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Entry
114247839 CDS
T05882
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114247839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114247839
Spliceosome [BR:
bman03041
]
Complex B
Other components
Prp19-related factors
114247839
Complex C
114247839
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
AAA_16
DEAD
AAA
UvrD_C_2
AAA_22
SLFN-g3_helicase
AAA_25
Parvo_NS1
PhoH
NB-ARC
Gag_p10
nSTAND3
DnaB_C
ATPase
Motif
Other DBs
NCBI-GeneID:
114247839
NCBI-ProteinID:
XP_028036700
UniProt:
A0A6J2K438
LinkDB
All DBs
Position
Unknown
AA seq
1435 aa
AA seq
DB search
MKTETPQPTDKLKIPLPTLSQINADRITQLANQYWSPQTKESHLPYDASIVESIYHAEIQ
GSSFSVRRIMMLEFSQYLENYLWPYYEAGKASHSHMMSIIVMINEKFRERVPAWQAFLKQ
PEHFPAFFEQVLRASIAEDDTSRNMREQTALLLFLNHCFGSMEVELCRDQVKRLVSLSMW
ISLQEGRRNQEFKAVPKWRKYWRAIQKKDKPELLEKLNWERRYLQRLMIKFMGILEKIPE
NGEIDSYVVRYCERFLELMIDLEALLPTRRFFNTVMDDCHLVVRCQMSALAQRPEGQLFT
QLLQMLKFYARFEISDQTGDPMTDRDMTLQHYSKITSLQKAAFSKFPDLRLFALANVASV
DTRETLQKHFKNLSDKALRAIATYLNLVPPEGKEDETPWHRLDKDFLRELLISRHERRIS
QLEELNLMPLYPTEEIIWDENVVPTEIYSGENCLALPKLNLQFLTLHDYLLRNFNLFRLE
STYEIRQDIEDAVYRLAPWNSEDGSVYFGGWARMAHPIKSFAVVEVAKPNIGEKAPSRVR
ADVTVTLSLRNEIKHEWENLRKHDVCFLVTVRPTQGIGTKYDYRKSMVDQAGIVYVRGCE
VEGMLDASGRVIEDGPEPRPELEGDSRTFRLLLDPNQYRLDLDRASKGNEDVYETFNIVM
RRKPKENNFKAVLETIRELMNTECVVPDWLHDIVLGYGDPGQAHYTRMPNEIATLDFNDT
FLNMDHLRNSFPGYEIKVQTNDPRKLVRPFKLTFENVVRKQQVGDAAMDEDEPRKAIIVE
PHVQPKRGPYLYNEPKKNNILFTPTQVEAIRSGMQPGLTLVVGPPGTGKTDVAVQIISNI
YHNFPWQRTLVVTHSNQALNQLFEKVAELDVDERHLLRLGHGEEALQTDKDFSRYGRVNY
VLAKRLELLELVSRLQRTLDAGSDAGATCELAHHFHVYHVRPRWRAFLENCQQQTNSIEI
VSKEFPFHEFFDDAPKPLFLRKSHEEDMEIAKSCYRYIDHIFEELEEFRAFELLRSGLDR
SKYLLVKEAKIIAMTCTHAALKRSELVQMGFKYDNILMEESAQILEIETFIPLLLQNPQD
GRSRLKRWIMIGDHHQLPPVVKNMAFQKYCNMEQSLFTRMVRLGVPYVELDAQGRARPSI
CNLYRWRYRALGDLCHVTQLPEYRAANAGLRHDFQLVNVDDFNGVGETEPSPYFYQNLAE
AEYVVAVFMYMRLIGWPAERISILTTYNGQKHLIRDVIDKRCADNPLIGRPHKVTTVDKY
QGQQNDIALVSLVRTKAVGHVRDLRRLIVAASRARLGLYIFARANLFRNCYELQPTFNQL
VERPLQLELVPGERYPAQRAAGVAVPPELLLSVRDMPHMARYVYDMYLHIVNDAPDARQE
SGWRAPGGREAARARGAGGHVPAHPGAAPDSDDESDAFTPTDILNEVDEPNAANS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgaaaccccacagcctacggataaacttaaaataccattaccgacactatca
cagattaacgcggatagaataacacagctagcaaatcagtactggtcaccgcaaaccaag
gaatctcacttaccttatgatgcttctattgtggagtcaatataccatgcagaaatccag
ggttcaagtttctcagttcgacgcatcatgatgttagagttctcacaatacctcgagaac
tatctgtggccgtactatgaagctggcaaggcatctcactcacacatgatgtctataata
gtgatgataaatgagaagttccgtgagcgagttcccgcttggcaggcatttttaaagcaa
ccggagcactttccggccttctttgaacaagtccttcgtgccagtattgctgaagacgac
actagtcgtaacatgagggagcagactgcattactgctattcctgaatcattgcttcggc
agcatggaagtagagctctgcagggatcaagtcaagaggcttgtgtcccttagtatgtgg
attagtttacaagaaggcagaagaaatcaggaattcaaagcggtaccaaagtggcgtaaa
tattggagagccatacagaaaaaggacaagccagagttattggaaaaattgaactgggaa
cgaagatatttgcaaagactgatgatcaagtttatgggtatcctagagaagatacccgaa
aacggggaaattgattcgtatgttgtgaggtactgcgaacgtttcctggaattgatgata
gacctggaagctttactgccgacgcgccgtttcttcaacacggtgatggacgactgtcat
ctcgtggtgcgctgtcagatgtcagcactcgcccagagaccagaggggcaactctttaca
caactgctacaaatgctgaagttttacgcaagatttgagattagcgatcagaccggagat
cctatgaccgaccgtgacatgacattacagcactactcaaaaatcacctcactacagaaa
gccgcattttccaagtttcctgatcttcgtttatttgccctcgcgaatgtcgcgagtgtc
gacaccagagaaacgttgcagaagcacttcaagaatttgagcgacaaagctttaagagca
atcgccacgtacctgaacctggttcctcccgaaggaaaagaagacgagacgccctggcac
cgactcgacaaagatttcctcagagagctattgatctcgcgtcacgagaggcgaatttca
caattggaagaattgaacttgatgcccctgtatcctacagaagagattatctgggacgag
aatgtagtgcccacagagatatacagcggagagaattgcctagccctgcctaagctgaat
ctacaatttttaacattacacgactatctgttacgaaacttcaatttgtttcgcttggag
agcacatacgagataagacaagacattgaagacgccgtatacagattggcgccgtggaat
tcagaagacggaagcgtttatttcgggggctgggcgcggatggcgcatcctataaagagt
ttcgcagttgtcgaagtggccaaaccgaacatcggcgagaaggccccgtcgagggtccga
gccgatgtcaccgtcacgttgagcctcagaaacgagataaaacacgaatgggaaaacctc
aggaagcatgacgtttgcttcctggtaactgtcagacctacacaaggcataggtacaaag
tatgactacagaaagagtatggtggatcaggcggggatagtgtacgtgaggggttgcgaa
gttgaaggtatgctggacgcatccggcagagtcattgaggacgggccggaaccgcggccg
gagttagagggagattccaggaccttcaggctcttactcgatcctaaccagtacaggctt
gacttggacagagctagtaaagggaatgaggacgtgtacgagactttcaatatagttatg
cgtcgtaaaccgaaagagaacaacttcaaggccgtattggaaacgatacgagaattgatg
aacaccgaatgcgttgtaccggactggcttcacgatatagtcttgggctacggagatccc
ggtcaagctcattacacgaggatgccgaacgagatagctactctggacttcaacgataca
ttcctgaacatggatcatctgcggaacagcttcccggggtacgaaatcaaggtgcagacc
aacgacccgaggaaactcgtcaggccgttcaagttgactttcgaaaacgtcgtacggaag
cagcaggtcggggacgcagctatggacgaagacgaaccccgcaaagcgatcattgtcgaa
ccccacgtacaaccgaagaggggaccgtatttgtacaacgaaccaaagaagaataatata
ctgttcactccgacacaagtggaagctatacgttcaggaatgcaacctggactcacactg
gtcgtcggtcctcctggaactggtaaaacggacgtggcagttcaaataatttcgaacata
taccacaacttcccatggcaacgtactctggtcgtaacgcacagcaaccaggccctgaat
cagctattcgagaaggtcgccgagctggatgtggacgaaaggcatctgctgcgtctcggt
cacggcgaggaagctcttcagacagacaaagacttctccagatacggccgcgtgaactat
gtgttggcgaagcgtctggagctgctcgagctggtgtcgcggctgcagcgaacgttggac
gcgggctcggacgccggcgctacgtgcgagctggcgcaccacttccacgtctaccacgtg
cggccgcgctggcgagccttcctcgagaactgccagcaacagacaaactcgattgagata
gtcagcaaggagtttccgttccacgaattcttcgatgatgccccgaaacccttgttcctg
aggaagtctcacgaagaggacatggaaatagccaaaagctgttacaggtatattgatcac
atatttgaagaattggaagagttccgagccttcgaactactgaggtccggactggatcgg
tccaagtacttgttggtcaaagaagcgaaaataatcgcgatgacgtgcacgcacgccgcc
ctcaaacgttcagaattagtgcaaatgggtttcaaatacgacaacatactgatggaagag
tcggctcaaatcctcgagatcgagacgttcataccgctgctgctgcagaacccgcaggac
ggcaggtcccggctaaagcgttggatcatgattggcgaccaccaccagctgcccccggtc
gtcaagaacatggcgttccagaagtactgcaacatggaacagagcctgttcaccagaatg
gtcagactgggtgttccgtacgtggaactggacgcgcaaggtcgagctagacccagcatc
tgcaacctgtaccgctggcgctaccgggcgctgggcgacctgtgccacgtgacgcagctc
ccggagtaccgcgccgccaacgcgggcctgcgacacgacttccagctcgtcaacgtggac
gacttcaacggcgtcggcgagaccgagcccagcccttacttctatcagaatttagcggaa
gcagaatacgttgtagcggttttcatgtacatgcgcctgatcggatggcctgcagagcgc
atctccatactgaccacatataacgggcagaaacatctcatcagggacgtcatagataag
cgatgtgccgataatccactcatcggtcgacctcacaaggtgacgacggtagacaagtac
cagggccagcagaacgacatagctctagtgtcgctggtccgtacgaaggcggtgggtcac
gtgcgcgacctgcggagactcatcgtcgccgcctcaagagcccgtctcggcctatacata
ttcgcgagggccaacctcttcaggaactgctacgagctacagcctacattcaatcagctc
gtggagcgtccactgcagcttgaactagtcccgggcgagcggtacccggcgcagcgcgcg
gcgggcgtggccgtgccgccggagctgctgctgtccgtccgggacatgccgcacatggcg
cgctacgtctacgacatgtacctgcacattgtcaacgacgcacccgacgctcgacaggaa
agtggctggcgggcgccaggcgggcgggaggcggcgcgtgcgcggggcgcgggggggcac
gttcccgcgcaccccggcgccgcgcccgacagcgacgacgagtcggacgccttcaccccc
accgacatactcaacgaagtcgatgaaccgaacgccgcgaactcataa
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integrated database retrieval system
