Bombyx mandarina (wild silkworm): 114249461 Help Entry 114249461         CDS       T05882                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism bman  Bombyx mandarina (wild silkworm) Pathway bman03030   DNA replication bman03410   Base excision repair bman03420   Nucleotide excision repair bman03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bman00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     114249461    03410 Base excision repair     114249461    03420 Nucleotide excision repair     114249461    03430 Mismatch repair     114249461  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:bman03032]     114249461    03400 DNA repair and recombination proteins [BR:bman03400]     114249461 Enzymes [BR:bman01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      114249461     6.5.1.6  DNA ligase (ATP or NAD+)      114249461     6.5.1.7  DNA ligase (ATP, ADP or GTP)      114249461 DNA replication proteins [BR:bman03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     114249461  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      114249461 DNA repair and recombination proteins [BR:bman03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      114249461    NER (nucleotide excision repair)     Other NER factors      114249461    MMR (mismatch excision repair)     Other MMR factors      114249461 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  114249461 NCBI-ProteinID:  XP_028038851 UniProt:  A0A6J2K979 LinkDB All DBs Position Unknown AA seq 885 aa AA seqDB search MNLTKSLFVNRLVKISYCLLYKQITSNRTICYNNKIYQETSHNMAQRSITSFFKKTPFTP MEIKSNGGSKVSHVNGDTSPISDEKDKPSERQQSNSIDNDGDSQDSLKPKNKAKRQRVIS SSSESESPVKVKKEDLSDNDDSITLNKSVNKTYDSPKNKKAKIKKEIKSPSPKKGAKSLS RDEVKENSLKLKIVGSKEKDNIVKNTEHIDNIENESEEIQKVAENAYNPSKSKYHPIKDA CWSKGEPVPYLALAKTLDLIEGTSARLKIIEILSNFYRSVMVLTSEDLLPCIYLCLNQLA PAYHSLELGIAETYLMKAIGQCTGRTLAQVKSAVQKCGDMGRVAEQARAAQKTMFAAPKL QIRKVFAALKEIAHMTGQASVNKKINKIQSLYVACRDCEARFLIRSLEGKLRIGLAEQSV LHALALAVATTPPGPNLQLDAAQHMSADKFKALVEQHVAVVRRTYCECPDWAELLHELLR GGVAALASRCSMRVGVPLRPMLAHPTRAVRDVLARFENEEFTCEYKYDGERAQIHVPAAP DDKPDFANAAIFSRNQENNTAKYPDVLSRLPTLLKEGVSSCVLDCEAVAFDAANGKLLPF QVLSSRKRACASAEDVRVPVCVFVFDLLYLNGAPLVGSTLAHRRKLLREHFCTQPGTWQF ATSKDCSTIEEVQLFLEEAVKESCEGLMVKMLTGDNSKYDIARRSHNWLKLKKDYLEGVG DTVDAVIIGAYRGKGKRAGVYGGFLVACYDPESEQFQSLCKLGTGFSDEDLQILSDMLKE HIIDSPRNYYNYDSSHSADVWTSAAVVVEVRCADLSLSPAHRAAIARLHPHKGVSLRFPR FVRVREDKAAEQATTAAQVAQLYLAQDQIKNQVKQPDAAHEDDFY NT seq 2658 nt NT seq  +upstreamnt  +downstreamnt atgaatttgactaaatctttattcgtaaatagattagtaaaaattagctattgtttgtta tataaacagattacaagtaaccgtacaatctgctataacaataagatttaccaggaaacc agtcacaacatggctcaaaggagtatcacgtcattcttcaagaaaactccatttacacct atggaaataaaaagtaatggtggatccaaagtaagccatgtaaatggggacacatcaccc atatccgacgaaaaagacaagccttctgaaagacaacaatccaacagcatagataatgac ggtgactcccaagattctttgaaaccgaaaaataaagctaaacgacaacgtgtgataagc tctagtagtgaatcagaatctccagttaaagtgaaaaaggaagacctttcagacaatgat gactctataactttaaacaagagcgtaaacaaaacttatgactcaccaaaaaataaaaaa gctaaaataaaaaaagaaatcaaaagcccatcacctaaaaagggtgcaaagagtttgtct cgtgatgaggtaaaagaaaacagcttaaaattgaagattgttggatcaaaggaaaaagac aatattgtgaaaaataccgagcatattgataatattgaaaatgagagtgaagaaatacag aaagtagcagaaaatgcatacaatccatcaaaatcaaaataccaccctataaaagatgct tgctggtctaaaggcgaaccagtgccgtatcttgcattagctaagactttggatcttata gaaggaacatcagctcgactgaagataatagaaatattaagtaatttttataggtccgta atggtgttgacttcagaagacttgttgccttgtatttacttgtgcttaaatcaactagca ccagcataccacagtttggagcttggcatagcagaaacgtacctaatgaaagccattggc cagtgtacaggccgtaccctagcacaagtgaagtctgcagtacagaagtgtggtgatatg ggaagagtggcagaacaggctcgagccgcacaaaagacaatgtttgcggccccaaaactt cagataagaaaggtttttgctgcactaaaagaaattgctcacatgactggtcaagcatca gtgaataagaaaataaataaaatccagtccttgtatgtcgcctgcagagattgtgaagca cgattcctaataaggtccctggagggtaagctgcgcatcggcctggcggagcagtcggtg ctgcacgcgctggcgctggccgtcgccaccacgccgcccggacccaacctgcagctcgac gcggcgcagcacatgtccgctgacaagttcaaggcgctggtggagcagcacgtggcggtg gtgcggcgcacgtactgcgagtgccccgactgggccgagctgctgcacgagctgctgcgc ggcggcgtggcggcgctggcctcccgctgcagcatgcgcgtcggcgtgccgctgcgcccc atgctcgcgcaccccacccgcgccgtgcgcgacgtgctcgccaggtttgagaatgaagag ttcacctgcgagtacaagtacgacggcgagcgggcccagatccacgtgcccgccgcgccc gacgacaagccggacttcgccaacgctgccatattcagcaggaaccaagagaataatacc gccaagtacccggacgtgctgagtcgcctgcccacgctgctcaaggagggcgtgtccagc tgcgtgctggactgcgaggcggtcgccttcgacgccgccaacggcaagctgctgcccttc caggtgctgtcgagccgcaagcgtgcgtgcgcgagtgcggaggacgtgcgcgtgccggtc tgcgtgttcgtgttcgacctgctgtacctcaacggcgccccgctggtgggcagcacgctg gcgcaccgccgcaagctgctgcgggaacacttctgcacccaacccggtacatggcagttc gccacgtccaaagactgcagcaccatcgaggaagtgcagctgttccttgaagaagctgtg aaagaaagctgcgaggggctcatggtgaagatgctcactggtgacaattcgaagtatgat atagccaggaggtcacacaattggctaaagttgaagaaagactacttggaaggcgtcgga gacacggtggacgctgtcattatcggagcctaccgcggcaagggcaagcgcgccggcgtc tacggaggattcctggtcgcgtgctacgaccccgagtccgagcagttccagtcgctgtgc aagctggggaccggcttctccgatgaggacctgcagatcttgtccgacatgctgaaggaa cacattattgattctccgagaaactactacaactacgacagctcccactccgccgacgtg tggaccagcgccgccgtggtggtggaggtgcgctgcgcagacctgtccctctcgcccgcg caccgcgccgccatcgcgcgcctgcacccgcacaagggcgtgtccctccgcttccccagg ttcgtgcgggtgcgggaggacaaggcggcggagcaggccaccacggcggcgcaggtggcg cagctctacctggcgcaggaccagatcaagaaccaagtcaaacaacctgatgccgctcac gaagacgacttctactga

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