Bombyx mandarina (wild silkworm): 114249923
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Entry
114249923 CDS
T05882
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03030
DNA replication
bman03410
Base excision repair
bman03420
Nucleotide excision repair
bman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114249923
03410 Base excision repair
114249923
03420 Nucleotide excision repair
114249923
03430 Mismatch repair
114249923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bman03032
]
114249923
03036 Chromosome and associated proteins [BR:
bman03036
]
114249923
03400 DNA repair and recombination proteins [BR:
bman03400
]
114249923
DNA replication proteins [BR:
bman03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114249923
DNA Replication Termination Factors
ELG1-RFC complex
114249923
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
114249923
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114249923
Check point factors
HRAD17(Rad24)-RFC complex
114249923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
AAA_22
RuvB_N
AAA_11
DUF815
AAA_assoc_2
AAA_16
RCF1-5-like_lid
AAA_5
AAA_7
AAA_30
DEAD
PhoH
ResIII
AAA_19
AAA_24
Mg_chelatase
bpMoxR
Sigma54_activ_2
AAA_3
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
114249923
NCBI-ProteinID:
XP_028039441
UniProt:
A0A6J2KAX5
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MTVGETGQNLPWVEKYRPKRLDDLVSHDDIIKTINQFMKENQLPHLLFYGPPGTGKTSTI
LACAKQMYTPQQFSSMVLELNASDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAM
TNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIV
TTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSI
LNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAE
ARLASGSSERVELAALIASFQIARDQVKLDTEVS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactgttggggaaacaggccagaatttgccatgggttgaaaaatatcgcccaaaaaga
ttggatgatttagtatctcatgatgatataataaaaacaataaatcaatttatgaaagag
aatcagctcccacatctactattctacggtcctcctggaaccgggaagacatctaccatt
ctagcctgtgccaaacaaatgtacactccacagcaatttagttcgatggtgttggaactt
aatgcttctgacgatagaggcattggcattgttagaggtcagatactcagttttgcctca
acaaggactatatttaaagcaggacctaaattaattatacttgatgaagctgatgctatg
acaaatgacgctcagaatgcactaaggagaattatagagaagtacaccgagaatgtaagg
ttttgcataatatgcaactacctgggtaaaattattccagcattacagtcgcggtgtacg
cgatttcgttttgcccctctcaagcaagatcaaattgtgccgagattacaagaaattgtc
acaacggaaggtgtaaaaatgtcagagggcggaatgaaggcgcttctcaccttgtccggg
ggtgatatgagaaaggttttgaatacgcttcaaagcacgtggctggcgtatcgtgacgtc
accgaagataatgtttacacttgcgtcggccaccccctccgcgccgatatcgacagcata
ctcaattggttgctaaacgaaaatgatttttccgcctgctttaaatccatacaagacttg
aagattgcaaaaggattagcactgagcgatatattggctgaagtccatactatcatacag
agagtgaaactgcctccagaagtattagtgtcattgctcataaagatgtcagacgctgaa
gcgaggttggcgagcggaagcagcgagcgggttgaacttgccgcgctcatcgcgagcttc
cagatcgctagggatcaagtcaaactagacacagaagtttcgtag
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integrated database retrieval system