Bombyx mandarina (wild silkworm): 114249953
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Entry
114249953 CDS
T05882
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03030
DNA replication
bman03410
Base excision repair
bman03420
Nucleotide excision repair
bman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114249953
03410 Base excision repair
114249953
03420 Nucleotide excision repair
114249953
03430 Mismatch repair
114249953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bman03032
]
114249953
03400 DNA repair and recombination proteins [BR:
bman03400
]
114249953
DNA replication proteins [BR:
bman03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114249953
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114249953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
AAA_22
AAA_30
RNA_helicase
RCF1-5-like_lid
PTCB-BRCT
AAA_assoc_2
AAA_14
AAA_16
AAA_5
AAA_17
AAA_19
RuvB_N
AAA_33
BRCT_2
NTPase_1
AAA_18
Gp44_lid
DUF1757
Tox-HNH-EHHH
Motif
Other DBs
NCBI-GeneID:
114249953
NCBI-ProteinID:
XP_028039481
UniProt:
A0A6J2KB11
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSKDIRSFFITTKKPVKSKEAVPDDDDIIPESPDVQIKKKKKEARKKRVILDDSDDEIQT
KKPKKSETHLNKKNKSTAELKEVKPIDLFGNAPIVRTEPIVKKEKNKTELGIHSDDEFEK
SLLEIDEIDHLEKNKNIDFTPLENGNNDKSHERKLQKEMKQKESIKLDKDLLPSLKDKEK
KTDSYNVNNLKNKSIIDEVKEGNKRKFSEFIETNIKDENAVSKKIKIEKKHKDESFSSKV
ESDLEMNCSAIDDEAGKKITKNRGNKSLNESVLSDEERHQRRVQSAALYKKYLNRSAPKH
LGSKEIPVGAPDCLKDCAFLLTGVLDSFEREEIEEAIKRYGGTVKPGVSRKVNYVLVGED
PGPAKIAKATDLGIPILNEDEFLKLISNSVNNTKLTTRDKGLKEKNIASKSKDEKERKCE
KSSSKERKKDKSKSPIKIKEENRNSTSKPSDDNVQNQVKTLNSEKQSSSRESVSSLGIGL
KCEQNHDTKCNKYMWVDKYKPQNVKQIIGQHGDSSNVKKLINWLTKWYVNRKAKLPKPSP
WAKNDDGGYFKAALLSGPPGVGKTTTVSLVCRELGFDAVEFNASDTRNKSLLKEQIGELL
STTSLSGYAKGDTSKQAVSKKHVLVMDEVDGMAGNEDRGGLQELINLIKSTSVPVICMCN
DRNSTKMRSLVNYCYDLRFNRPRVDQIRAAMMSICFKEGIKVAPDVLTQLIVASNQDVRQ
TLNLLSMWAVDEALASADKLKRDANTTKKDVKLGPWEAVRKVFSAEEHKTMSIHDKSDLF
FYDYNLAPLFVQENYLQVAPHCPKHEVLERFSKAADSISIGDMVSARIRGSQAWSLLPIQ
AMYSSVLPGHVVSGHVVGQIQFPGWLGKNSRANKMHRLAQEIHAHTRLSTSGSKSSIYLD
YSSHLRDAIVNPLINEKTDGITKSLEILESYHLLREDLDSLIELSLWPGQRNPTVLIEAK
VKAAMTRTYNKTASALPYAPGAVKKGRNRNDDEMDDGDEAGDVTEEENSDAENDAFIKKK
KTKDSEKSDLSKEKPSTSKAKTNKEKKKKK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggatataagatcattttttatcacaacgaagaaacctgtaaagtccaaagaa
gcagttcctgatgatgatgatattattcctgaatctcctgatgtacaaattaaaaagaag
aaaaaagaagcaaggaagaaaagagttatattagatgactcagatgatgaaatacaaacg
aaaaaaccaaaaaaatctgaaacacacttaaataaaaaaaacaaatctacggcagaatta
aaagaagtgaaaccgatagatttatttggaaatgcacccatcgtgagaactgagcccata
gttaaaaaagaaaagaacaaaacagagttaggaatacattcggatgatgaattcgaaaag
agtcttcttgaaatagatgagattgatcatctagaaaaaaataaaaatattgattttacg
ccattagaaaatggaaacaatgataaatcacacgaaagaaaactgcaaaaagaaatgaaa
cagaaagaaagtattaaattagacaaagatttattaccttctttgaaagataaagagaag
aaaacagatagctacaatgttaataatttaaaaaacaaaagcataatagatgaagttaag
gaaggtaataaaagaaaattctctgaatttattgagacgaacattaaagacgaaaatgct
gttagcaaaaaaattaaaatagaaaaaaaacataaagatgagagtttcagttcaaaagta
gaaagtgatttagaaatgaattgttcagcaatagatgatgaagctggcaagaagataacg
aaaaatagaggaaataagagtttaaacgaatcagtattatcagatgaagagaggcatcaa
cgtagagtacaatctgctgcattatataagaaatatctcaacagatcagcacctaaacat
ttaggatccaaagaaattcctgtgggtgcgccggactgtcttaaagattgtgcattccta
ctgactggagttttggattcatttgagagggaagaaatcgaggaggctatcaaaagatac
ggtggaacagttaaacctggtgttagcaggaaggtaaactacgttctggttggtgaagac
ccaggacccgcaaagattgctaaggcgacagacttgggcatccccatattaaacgaagac
gagttcctaaaattgatctccaattctgtaaacaatactaaacttactaccagagataaa
ggtctaaaagaaaaaaatatagcatctaaatcaaaggatgaaaaagagaggaaatgtgaa
aaatctagcagtaaagaaaggaagaaagataaatcaaagagtcctattaagattaaggag
gaaaatcgtaattctacatccaagccttcggatgacaatgtccaaaatcaagttaaaaca
ttgaattcagaaaaacaatcaagttcaagggaatcggtgtctagtttaggaataggtttg
aaatgtgaacagaatcatgataccaaatgtaataaatacatgtgggtggataaatacaaa
ccgcagaatgtaaaacaaataatcgggcagcacggcgattctagtaatgttaaaaaatta
atcaattggttgacaaaatggtacgtgaatagaaaggccaagctgccaaagcccagtcct
tgggcgaagaatgatgatggaggctacttcaaggcggccctgctctctggacctccagga
gttggtaagacaaccacagtgtcgctcgtgtgcagagaactaggcttcgacgcggtcgag
ttcaacgcgtccgacacgagaaataaatccttgctcaaagaacaaatcggcgagctgctg
tccacgacttcactgtccggatatgccaaaggcgacacgagcaagcaggccgtctccaag
aaacacgttttagtaatggacgaagtcgacggcatggcgggaaatgaggatagaggcggc
ctgcaagagttgataaatctgataaaatcaacatcagtgccagtgatatgtatgtgtaac
gacagaaacagtacgaagatgaggtccctggtcaactactgctatgatttgaggttcaac
agaccaagagtggatcagatcagggccgcgatgatgtcgatatgtttcaaagaaggaatc
aaagtggccccggacgtgctgacgcagctgatcgtcgcttctaaccaagacgtgcggcag
accctcaacttactctcgatgtgggcggtcgacgaggcgttggccagtgcggacaagtta
aaaagagacgcaaacaccacgaagaaggatgtcaaattgggtccatgggaggcagtaagg
aaagtgttctccgcagaagaacataagactatgagcattcacgataaaagcgatttgttc
ttttacgactacaacctcgctcctctgttcgtgcaggagaattacttgcaagttgcacca
cactgtcccaaacacgaggttctagagagatttagtaaagcggccgacagtatcagtata
ggcgacatggtttctgcgagaatcagaggcagccaggcgtggagtcttctgcctattcag
gccatgtacagctcggtgctcccgggacacgtggtgtcgggtcacgtggtcggccaaatc
cagttcccgggctggctcgggaaaaactctcgcgccaacaaaatgcaccggctcgcccag
gagatacacgctcacacaagactcagcacctcagggtcgaaatcttcaatatacctcgat
tactcatcacatctaagagacgcaatagtcaatccacttatcaatgaaaaaacagatgga
atcacaaagtccttagaaatattggaatcctatcatctcctgagagaagatctggattct
ttgattgagctatctttgtggcctggacagagaaatccgacagttttgattgaagccaag
gtgaaagctgctatgactcgaacgtacaataagacggctagcgctctgccatacgcgccg
ggagccgtgaagaaaggtcgaaatagaaacgatgacgaaatggatgacggtgatgaagca
ggtgatgtgaccgaggaagagaacagcgacgcagagaatgacgcatttataaagaagaaa
aagacaaaagacagtgaaaaatcggatttaagtaaagaaaaaccgagcacaagtaaagct
aaaacaaacaaagaaaagaagaagaagaagtaa
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integrated database retrieval system
