KEGG   Bombyx mandarina (wild silkworm): 114250063
Entry
114250063         CDS       T05882                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114250063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bman03400]
    114250063
DNA repair and recombination proteins [BR:bman03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     114250063
SSDB
Motif
Pfam: XRCC1_N BRCT LIG3_BRCT BRCT_2 PTCB-BRCT DUF6879
Other DBs
NCBI-GeneID: 114250063
NCBI-ProteinID: XP_028039598
UniProt: A0A6J2KD85
LinkDB
Position
Unknown
AA seq 587 aa
MPRVKIDYVVSFSSEDPDHPANNLLALEVNKKKWLCCKGESSCSVVLQLAKAVQISSVYL
GVHHAATVEVLVGRSEKPDEPFEVLVPSSVMLSPSESRRAEGVQRVRAWRGDQLAAAARG
RRWDRLRVVCAQPYNRHCQFGLSFLHIDEPGDGPPPAPPRPLALDTFSSDEEEFKPGELF
AKYYTQKDSPLKLGDDKTSSPASTESQIHKATSRALRNVPGDSPATSPGLSAAATLRQSK
QKRPAGRRRSDSDGDARMHDEEDTRHHAKIDQTVNRHKGDKMTDDNSAGDPKEVQKNIDN
ISSRAKRVKRDDSAGTAPAPRGQLVACVAADVLRGVRFVLSGYQNPLRQELRREGVALGA
RWEPVWGPACTHLICAFPNTPKLQEVRRVAGGAVPAVRADWLRACRRARRRLPWRPYATE
PHQRTAPPHAAETDESADTDEDVRDRGRAPSPRAGATGSRGDSGEPDVQFVCDERVKASL
AVESDSDETDAGADSGAEHAIDDSKSLPAFFEGVTFAVEAGDTQLRARCWRYLRAYGGRV
LQKSQLDEDSRVDYVVCDDGAAPRIKGRAVTAAWLWKCHQQRKLCPI
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgccgcgcgtgaaaattgattacgtcgttagcttcagcagcgaggatcctgatcaccca
gctaacaatctgttggcattggaagtgaacaagaagaaatggctgtgctgcaagggagag
tcttcctgctcagtcgtacttcagctggccaaggcagtccagatatcatcagtctatctt
ggtgtgcatcatgctgctactgtggaggtgctcgttggaagatctgaaaaacctgatgaa
ccctttgaggtactggtccccagcagcgtgatgttgtcgcccagcgagtcccggcgcgcc
gagggcgtgcagcgcgtgcgggcgtggcgcggcgaccagctggcggccgcggcccggggg
cgccgctgggaccgcctgcgggtcgtgtgcgcgcagccctacaacaggcactgccagttc
ggcctctcgttcttgcacatcgacgagcccggggacggacccccgcccgcgccgccgcgc
cccctcgccctggacaccttctcgtcggacgaggaagagttcaaacctggggaattattc
gctaaatactacacccagaaggatagtccgctgaaactgggggacgataaaactagcagc
ccggcgagtacagaatcccaaatacacaaggcgacgtcccgcgcgctccgcaacgttccc
ggggactcccccgccacctcccccggcctcagcgcggcggccacactccgacagagcaaa
cagaagaggccggccgggcggcgccgctccgacagcgacggggacgctcggatgcacgat
gaagaggacaccagacaccatgcaaaaatagaccaaaccgttaatagacataagggtgac
aagatgaccgatgacaatagcgcgggggacccgaaagaagtccagaaaaatatagacaat
atatcatcgagagcaaagcgggtgaagcgagacgacagcgccgggaccgcgcccgccccc
cggggacagctcgtcgcgtgtgtcgcagcggacgtgctgcgcggcgtgcgcttcgtgctg
agcggctaccagaacccgctccgccaagagttgcgccgcgagggggtcgcgctgggggcg
cgctgggagcccgtctgggggcccgcctgcacgcatctcatatgcgcgtttcccaacacg
ccgaagctgcaggaggtgcggcgcgtggcgggcggcgccgtgcccgccgtgcgcgcggac
tggctgcgagcgtgccgccgcgcgcgccgccgcctgccctggcgcccctacgccacggag
ccgcaccagcgcaccgcaccaccacacgctgcagaaactgacgagtcagcggacaccgac
gaggacgtgcgggaccgcggccgggcgccgagcccccgcgccggcgcgacagggtcgagg
ggggacagcggcgagcccgacgtgcagttcgtgtgcgacgaacgggtcaaggcgtcgctc
gcggtcgagtcggactcggacgagaccgacgccggggccgacagcggcgccgagcacgcg
atagacgacagcaagtcgctgccggcgttctttgagggagtaacgttcgcggtggaggcc
ggggacacacaactgcgggcgcgctgctggcgctacctgcgggcctacggggggcgcgtg
ctgcagaagtctcagctggatgaggacagccgcgtagattacgtggtgtgcgacgacggc
gccgcgccgcgaatcaagggccgcgccgtgactgcagcctggctgtggaaatgtcatcaa
caacgaaaactgtgtccaatataa

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