Bombyx mandarina (wild silkworm): 114250114
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Entry
114250114 CDS
T05882
Name
(RefSeq) ATP-dependent RNA helicase DHX30-like
KO
K13185
ATP-dependent RNA helicase DHX30 [EC:
5.6.2.6
]
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bman03041
]
114250114
03029 Mitochondrial biogenesis [BR:
bman03029
]
114250114
Enzymes [BR:
bman01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114250114
Spliceosome [BR:
bman03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114250114
Mitochondrial biogenesis [BR:
bman03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
114250114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
DSRM_2
AAA_19
AAA_30
ABC_tran
Motif
Other DBs
NCBI-GeneID:
114250114
NCBI-ProteinID:
XP_028039651
UniProt:
A0A6J2KBJ0
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MFLCKSSVTRSSIWTKYNFYDSLLNNVGQRYRGYISFQKLAKTTIFSSNKNIFKQANKLK
INCPLRKLSSNILSGDEKNLKSAQEEKDLNIISKIFPQPRVTLNILQSRTPEKAFEVFYK
QNIVTLKGKKKKMLQNDWNCTYAFVWPEKVKFESTAISKRLAAEKAASKALHWLYINNRI
DENGAPIYDRDVLNDIRGNLNEPIQITISDKSMERIDKIWNDYESGIKEIYEATFKEARQ
RLLQTSLVTKDSTIDEDDYSDNVFENENCTNDIFEQKSNVHPVYGRIITEPSENTLTKRE
RTLTRKFELYDAEKTPLPIDGYAKQISEAVEASRVTVVVGEAGCGKSTRVPIALLQNSLL
STAIVSEPRRVAAIGLAQRVASELGEEVGETVGYQVRLHSKPPRPPAGSVLYCTSGVLLR
RLQANPGLVGCTHVLIDEAHERDVNTDVTLLLLKRALKINSELKVIIMSATLDVDVFTRY
FGQCPVIAVPGRTYPVEVTYLDDIQKKFNLNLPKTMESISRAGGRPTVHCQEIAEVIKAI
DRTQEEGAILVFLPGWAEIKYTMQILEEHYRGSNLHMLVPVHSRLSALEQARIFSAAAAG
VRRVLLATNVAETSLTVPDVTHVLDTGAHRENTTDQSAGTLCLETAWVSQAAAKQRCGRA
GRVRAGHCYKLYTRQKEQEFRPHSTPEILRVPLVQTVLDCKSYAPDDRIEDFLSQLPEPP
GSDAIDFAVNDLVEIGALTGRQQLTRLGGLLCGLALAPRVAVCLLHSVAIGNVIAAATIA
THVSDNLQLFHDAAQRKAEILEMKRKFSPTCDYSALYWIQREFEQKLSELGGGEAGRWCT
QHGLSRERLKNVKDLTNLYLEQLLKTGVVEPTIEAEELNRFSGIDELTSAVLLSGSDALL
TASRRLRTKGKLATETVLYTSSRERAHVSSESVNHNVIKRGDKCKLIAYFGGHRSAERRA
LVLHKTSLVPPQTALLFSPSDVRKEASDSETTILSIPKHNLRIHMPTCQADYLLKAREML
WNTFKYQIERNMNTLDYGDNTKVSRFRVRLVKSIGRILVEGSRECLEGKKEKVFVDDE
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtgtaagagttcagtgactagatcaagtatttggacaaaatataacttttat
gatagcttgcttaataatgtcggccagcgataccggggttatatcagttttcaaaaactg
gcgaaaaccacaatatttagtagtaataaaaacatatttaaacaagccaataaattaaaa
atcaactgcccactcagaaaattatcttcaaacatattgagtggagatgaaaaaaatttg
aagagtgctcaagaagaaaaagatctcaatataatatcaaaaatatttccgcaacctcgt
gtaacacttaatatattacaatcgaggactccagagaaagcgtttgaagtgttttacaaa
cagaacatagtgacactgaaagggaaaaagaagaaaatgttacagaacgattggaactgc
acatatgctttcgtttggccagagaaggttaaatttgaaagcaccgccatttcaaaacgt
ttggccgcagagaaggcagcgtcaaaggccctgcattggctgtacatcaacaatcgaata
gacgagaacggagcgccaatatatgacagagacgtattaaatgacatcaggggtaatctg
aatgaaccaatacagattaccatcagcgataaatcaatggagagaattgacaaaatatgg
aatgattatgagagtggaataaaagaaatatacgaggcgaccttcaaagaagcgaggcaa
aggctgctgcagacctcacttgtgactaaagattcgaccatagacgaagatgattactcg
gataatgttttcgaaaatgagaactgtaccaacgatatttttgaacaaaaaagcaacgtc
catcccgtgtacggaaggatcataacggagccgtcggaaaacacattaacgaaacgcgag
agaactctgacaaggaaatttgaactttacgacgccgagaaaactcctttgcccatcgac
ggatacgctaagcaaatatctgaggcggtcgaagccagccgggtgactgtggttgtgggg
gaagctggctgtgggaagtccacgcgagtgccgatcgcgttgttgcaaaactccttgttg
tcgaccgccattgtgtcggagccgagacgcgtggccgccatcggactggcgcagagagtc
gccagcgaactaggggaggaggttggagaaacagtcggttatcaagtgcgcttgcactcg
aagccgccgcggccgcccgccggctccgtgctctactgcaccagcggggtcctgctgagg
aggctgcaggccaacccaggtctcgtaggctgcactcacgtgctcatagatgaggctcac
gagagggacgtgaacaccgatgtgaccttattgcttttgaaaagagctttgaaaatcaat
tcggaacttaaagtcattataatgagcgccacgcttgacgtcgacgtgttcactagatat
ttcggacaatgtccggtgatagcggttccggggagaacttacccggtcgaggtcacgtat
ctcgatgacatacaaaagaagttcaatttgaatttgcccaaaacgatggagagtatctcg
agggcgggcggtagaccgacggtccactgccaagagatagccgaagtgataaaagcgatc
gacagaacgcaagaggaaggtgcgattttagtgttcctcccgggctgggccgagataaaa
tatacgatgcagatattagaagagcactatcgaggctcgaacttgcatatgctcgtgcct
gttcattccagactgtcggcgttggagcaggcgcgcatattctcggcggcggcggcgggc
gtgcggcgcgtgctgctggcgaccaacgtggcggagacgtcgctgacggtgccggacgtc
acgcacgtgctggacaccggcgcgcaccgggagaacaccaccgaccagagcgcgggtaca
ttatgtctggagacggcgtgggtgtcgcaggccgccgccaagcagaggtgcggacgagcc
gggagagtgcgagcgggtcactgctacaagctgtacacgaggcagaaggagcaggagttc
cggccgcactccacccccgagatactgagggtgccgctggtgcagacggtgctggactgc
aagtcgtacgctccggacgacaggatcgaggacttcctgtcgcagctgccggagcccccc
ggctcggacgccatcgacttcgccgtcaacgacctcgtggaaattggtgctctaactggc
cggcaacagctgacacggctcggcgggctgctatgcgggctggcgctggcgccgcgggtc
gctgtctgcctgctacactcggtggccattggcaatgtcattgccgccgccacgatcgcc
acgcacgtcagcgacaacttgcagctgttccacgacgctgctcaacgcaaggcagaaata
ctcgagatgaagcgcaaattcagtccgacgtgtgactacagcgccctgtactggatccag
cgcgagttcgaacagaagctgtccgagctcggcgggggggaggcggggcgctggtgcacg
cagcacggactcagtagggagagattgaaaaacgttaaagatctgacgaacttgtatctg
gagcaactactgaaaactggcgtagtagaacctacgatagaggcggaagaactaaacagg
ttcagtggtattgacgagctgacgtccgccgtgctgttgtccgggagcgacgcgctgctc
accgcgagccgcagactcaggaccaaagggaaactcgccacggaaaccgtgctatacacc
agctcccgcgaacgcgcccacgtcagcagcgagagcgtgaatcacaatgtgatcaagcgc
ggcgataaatgcaagctgatcgcgtatttcgggggccaccgctcggccgagaggagagcc
ctcgtgctccacaagaccagcctcgtgcccccgcagaccgccctgctgttcagcccgtct
gacgtgcggaaggaggcatcggacagtgaaacaacgatattgtctataccaaagcataac
ttaagaatacacatgccaacctgtcaagcagattatttattaaaagccagagaaatgctg
tggaacacattcaagtaccaaatagagagaaatatgaatactctagattacggtgacaac
actaaagtatcaagattcagagtcagactagtcaagagcatcggaaggatattagtggaa
ggatcgcgagagtgcttggaaggaaagaaggaaaaagtatttgttgatgacgaataa
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