Bombyx mandarina (wild silkworm): 114250232
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Entry
114250232 CDS
T05882
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114250232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114250232
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114250232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
HBS1_N
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
AAA_22
FlgN
Motif
Other DBs
NCBI-GeneID:
114250232
NCBI-ProteinID:
XP_028039827
UniProt:
A0A6J2KFW0
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MARHRNIRNRSYSDDYDDDDFYGHSVEEDSCLSPSDASQWIYDRSRNQQVISNLLDRHSN
IQEEAEDEVKDVQVPGPQRRESTDLRSLKLEAEDETRLMSCLDELRNILGDTVSENTMIQ
SVLKHNFDYNKALDDILNSDKSKNKDSSTSKPVKPIITNTVKTTTALVAPKVIATSVDQK
SAVIKGFKVDQEPKPNSRPQTPRGQSPHPEKSKTEQNDDMKNLKVKENKIDAKKQYANER
GSDKDHLYIVVIGHVDAGKSTLMGRLLCELGEVSQKTLHKYEQESKKIGKQSFMYAWVLD
ETGEERVRGITMDIGRAQIETKTKRVIILDAPGHADFIPNMITGAGQADVAMLVVDATRG
EFESGFDFGGQTREHALLVRSLGVSQLAVAINKLDTANWSQDRFNEITNKLKVFLKQAGF
KDTDVTYVPCSGLIGENLVKPASEPELTKWYKGPCLLDVIDKFNVPERPVSKPLRISIND
VFKGTGSGFCVSGRIENGVLKKGDKVLVCPTKEMAEVRSLSINDLTNNVAFAGDQVTLTL
SGVDMQNVSVGYILSDPVEQVSVTTRFEARIVVFNVKVPITKGFPVLVHYQSLVESANIV
KLKALLSKSTGELIKKKPRCLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRVAGVTI
AAGLVTDIIST
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacatcgtaacattcggaacagaagttactctgatgactatgatgacgatgat
ttttatggacattcagtggaagaggatagttgtttatctccaagtgatgcgtcgcaatgg
atctacgaccgatcacgaaaccaacaggtgatatctaaccttctcgatagacacagcaat
atccaggaggaagccgaagatgaagttaaagatgttcaagttccgggcccacaacgaaga
gagtctaccgacctccgcagcctcaagcttgaagcggaagatgaaaccaggctcatgtct
tgcttagatgaacttcggaatattttaggtgatacagtatcggaaaatacaatgattcag
agtgtgcttaaacataattttgattacaataaagctttagacgatatacttaatagtgat
aagagtaaaaataaagattcatccacatctaaaccagttaagcctattattactaataca
gtgaaaaccacaacagcattagtagctcctaaagttatagctacaagtgtagatcagaag
agtgctgtaatcaagggttttaaagtggaccaagagccaaagcctaatagtcgccctcag
acacctagagggcagtctcctcacccagaaaaaagcaagactgaacaaaatgatgacatg
aaaaatttaaaagtaaaagagaacaaaattgatgcaaaaaaacaatatgccaatgagaga
ggttctgacaaagatcatttgtacattgtcgtgataggtcatgttgatgcaggaaaatct
acattaatgggcagattattatgtgagctcggagaagtcagtcaaaaaactttgcacaaa
tatgaacaggagagtaaaaagattggaaagcaaagctttatgtatgcctgggtgcttgat
gaaacaggagaggaaagagtccgaggcatcactatggatattgggcgtgcccagattgaa
acaaagacaaagagggttataatattagatgcaccagggcatgctgattttatccctaat
atgataactggtgctggtcaagctgatgttgctatgttggtagttgatgcaactagggga
gagtttgaatccggattcgatttcggtggtcaaacaagagaacatgcattactagtgagg
tcacttggtgtaagtcagctggctgttgccattaacaaactggatacagccaactggtct
caagacagatttaatgaaatcaccaataaacttaaggtttttttgaaacaagcaggattc
aaagatacagatgtcacctatgtgccttgttcaggactcattggtgagaatcttgtgaaa
ccagcaagcgaacctgaattaactaaatggtacaaaggaccctgtcttttagatgtgatt
gacaaattcaatgttccagagaggcctgtgtctaagccattacgtatttcaatcaatgat
gtgttcaaaggtaccggttctggattttgtgtttcgggacgcattgaaaacggagttcta
aagaagggcgataaagtattggtttgtccaacaaaagaaatggctgaagttagaagttta
agtataaatgatcttactaataatgtagcatttgctggagaccaagtcacattgactttg
tctggggtggacatgcagaatgtgtcagttggatacatactcagcgatcctgttgagcag
gtttctgttacaacacgtttcgaggcccgaatagtagttttcaatgttaaagtaccaata
acaaaaggctttccagtgcttgttcactatcaatcattggtggaatctgctaatattgtc
aagcttaaggcattactcagcaaaagtaccggtgagctaattaaaaagaaacctcgttgc
ttaggaaataattctgtggcagttgttgaaattgagaccagcaggcccatatgcatcgag
agatataaagatgttaaggagcttggtcgtgttatgttacgcgtcgcaggtgtcaccata
gcagcaggccttgtcactgatattatcagcacatga
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