Bombyx mandarina (wild silkworm): 114250281
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Entry
114250281 CDS
T05882
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114250281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114250281
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114250281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
114250281
NCBI-ProteinID:
XP_028039895
UniProt:
A0A6J2KD67
LinkDB
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Position
Unknown
AA seq
446 aa
AA seq
DB search
MAETAIETTPGDENDDNWLYGDSGGDANQESTEETQEVQKSADVVGGADEENQDEEEGNN
DSELNDEHFAEVTREDQNGDADSQENGDSDSDDSDDVKVTIGEIKSGSQYASLNIKRGVG
LVASAGGPEKPRSVTTTSGKVTLEDLEGPGSINGVPALEFNIDTIEDKPWNKPGADISDY
FNYGFNEVTWSAYCERQRRMRINETGVGMHMGSVPRPPMPDMRRPPNIRHDDGIPPPMTN
NYQSRENTIQVMTAERREYGRGHPREMPPPEFFSGPPTDYYQPPHATYDEPWGNPFTGHG
QAPGGWTPSDIKELTPAPGALPPAAPPTLPPAAAPLSMHPPYAPPYRQTHPADTRERHRR
DDEDRDRDRDRDRDRERSRSTKPERLREKSYRRDRSRSRSRRHKSRSRSPRMRERSRDRD
RSRDRDRDRSRDRERSIKPKIKDKDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacggccattgagaccacaccgggcgatgaaaacgatgataattggttatac
ggggattctggcggagatgctaaccaagaatccactgaggaaactcaagaagtacaaaaa
tcggccgacgtcgtcggtggtgctgacgaagaaaatcaagatgaagaggaaggtaacaac
gattcggaattgaatgatgagcattttgctgaggtaacgcgcgaggatcaaaatggtgac
gctgatagccaagagaacggtgactctgactcggacgacagcgatgacgtcaaagtcacc
attggagagatcaagtctgggtcacagtatgccagcctaaacataaaaaggggagttggc
ttggtagcttctgcagggggacctgagaaacctcgttcagtaactacaacaagtggaaaa
gtgacattagaggacttggaagggccaggaagtattaatggagttcccgctttggaattc
aatattgatactatagaagataaaccttggaataagccgggtgctgatatatcagattat
ttcaattatggttttaatgaagtaacatggagcgcttattgtgagcggcagcgacgaatg
cgaatcaacgaaacaggtgtgggaatgcatatgggatcggttccccgtccaccaatgcca
gacatgaggcgccccccaaatattagacacgatgatggaataccacctcccatgacaaat
aactatcagtccagagaaaacactattcaggtgatgacagcggagcgacgcgagtacggg
cgcggccacccccgcgagatgccgccgccggagttcttctctgggccgcccactgactac
taccagcccccgcacgctacatatgacgagccatggggtaacccgttcacaggacacgga
caggcaccgggcggctggaccccctccgacatcaaggagctgacgccggcgccgggcgcg
ctgccccccgccgcgccccccaccctgccccccgccgccgcgcccctctccatgcacccc
ccctacgcgccgccctaccgacaaacgcaccccgccgacaccagggagcgacaccgccga
gatgatgaggatcgagaccgcgaccgcgacagggaccgcgaccgcgaacgctcccgctcc
actaaaccggagagactgagggaaaaatcatacagacgtgaccgatcgcgttcgagatct
cgccgtcacaagtcccgatctcggtcaccgcggatgcgagagagatctcgagaccgtgac
cgatccagggacagggaccgagatcgatctcgagaccgggagcgcagcatcaagccgaaa
atcaaggataaagacgattga
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