Bombyx mandarina (wild silkworm): 114250945
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Entry
114250945 CDS
T05882
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03082
ATP-dependent chromatin remodeling
bman03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114250945
03083 Polycomb repressive complex
114250945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bman03036
]
114250945
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114250945
Histone modification proteins
HAT complexes
HATB complex
114250945
HDAC complexes
Sin3A-HDAC complex
114250945
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114250945
PRC2.2
114250945
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114250945
Heterochromatin formation proteins
Other heterochromatin formation proteins
114250945
Chromatin remodeling factors
NuRD complex
114250945
NuRF complex
114250945
NuRF complex (fruit fly)
114250945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
114250945
NCBI-ProteinID:
XP_028040858
UniProt:
A0A6J2KGZ5
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MGDKGDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQTAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPA
SELESAVNVNHG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggagataaaggagacggagaaaccttcgatgacgcggttgaagagagagtaatcaac
gaagaatataaaatatggaagaaaaatacaccatttctgtacgacttggtgatgacccat
gcactggagtggccctcgctcactgcccagtggctccccgatgtcaccaggccagacgga
aaggattattccgtacacagacttatcttaggaacacacacatctgatgaacagaatcac
ttgctgatcgccagtgtgcaactacctaatgaagatgcacaatttgatgccagccattat
gataatgataaaggagaatttggaggctttggttctgtatcaggcaagattgatatagaa
attaagatcaaccatgaaggtgaagtgaacagggcccgctacatgccccagaatccttgc
gtcatcgcaacgaagacgccgtcgtctgatgtacttgtctttgattatacaaagcacccc
tccaaacctgagccttctggagagtgccatcctgatctaagattgcgtggtcatcaaaaa
gaaggttatggcttgtcatggaatccaaaccttaatggatatcttttatcagccagtgat
gatcatacaatctgcctgtgggacatcaacgcgacgccaaaggaggggcgggtcatcgaa
gcgaagtccgtgttcaccggccacacggccgtcgtcgaggacgtcgcgtggcacttgcta
cacgagtcgctcttcggatccgtggctgacgaccagaagctgatgatatgggacaccaga
tgtaataatacatcgaaaccatcccacacagtggacgcacacaccgctgaagttaactgc
ctcagtttcaatccctattcagagttcattcttgctactggcagtgctgataaaacggtt
gcgctttgggatctacgcaatttgaaattaaagctacactcgttcgagtcgcacaaagac
gaaatattccaagtacaatggtcgccacacaacgaaactattctcgcgagcagtggtacc
gacagaagactccatgtatgggacttatcaaagattggcgaggaacagacagctgaagat
gcagaagatggacccccagaattattgttcatacacggaggacacaccgctaagatatct
gacttctcatggaaccctaatgaaccatgggtcatctgttccgtctctgaggataacatt
atgcaggtgtggcagatggctgagaatatctacaacgacgaggagccggagacgccggcg
tcggagttagagtcggccgtcaacgtcaaccacggctag
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