Bombyx mandarina (wild silkworm): 114250993
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Entry
114250993 CDS
T05882
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114250993
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
114250993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_11
TPR_10
TPR_6
ARM_TT21_5th
TPR_9
TPR_Slam
ARM_TT21_N
TPR_7
Coatomer_E
ARM_TT21_4th
ANAPC3
Fis1_TPR_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
114250993
NCBI-ProteinID:
XP_028040937
UniProt:
A0A6J2KJ14
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MSLEIPLMSTDEVIDLDPEQLPSGDEVLSILQQERSQLNVWINVALAYYKQKKIDDFLKI
LEASRTDANIDYRDFERDQMRALDMLAAYYVQEANKEKSKDKKKELFTKATLLYTMADKI
IMYDQNHLLGRAYFCLLEGDKMEQADAQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGAL
AFYKKALRTNPDSPAALRLGMGHCFMKLNNQEKARMAFERALQLDPQCVGALVGLSILKL
NLQESESNKIAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYNKVQHLALHAFHNTENEA
MRAESCHHLARAFHAQGDCDKAFQYYYQATQFAPPNFVLPHYGLGQMYIYRGDTENAAQC
FEKILKAQPGNYETMKILGSLYANSPSQSKRDIARQHLKKVTEQFPDDVEAWIELAQILE
QNDLQGSLNAYSTAMKILKEKVNADIPAEILNNVAALHYRLGNLNEAKKYLEEALEREKS
DAEALDAQYYNSIAVTTMYNLARLNEALCMYNKAEKLYKDILKEHPNYIDCYLRLGCMAR
DKGQIYEASDWFKEALKVNTEHPDTWSLLGNLHLAQQEWGPGQKKFERILQNSSTSNDAY
SLIALGNVWLQTLHQPCREKDREKRHQERALTMYKQVLKTDPKNIWAANGIGCVLAHKGC
INEARDIFAQVREATADFPDVWMNIAHIYVEQKQYINAIQMYENCIRKFRMQHDVEWLTW
VARAQGLAGRARCARGALLRARRVAPHDPALQYNTALTLRRRAAAVLKDDRADLALVLRA
VHELQVSHRYFERLSSEGAAEGGAGAAGGGPWGGAAVEARTCADLLSQAQWHVARARRQH
HEELSLRDKQREQREAFRRQQEEERRIREEQQQKSTVEMLQKRQEYKEKTKNALLFTEMP
ESKPRGGGRGRRRDEYISDSPGSGSDRPPEEKREAKQKKRKREGGEGKKGKSRKRREQRG
SGSDSDPPRKKGRKRGEKGIGRRERAKAKAAEEKLSAKQRAKIVSKETISTSESDSDNSR
KSRSRSRSRSKSGSGSPPAAKGRKRIMSASDSDRSRSKSKSRSKSKSRSRSRSGSGKSRS
RSKSRSKSKSRSRSKSRSRSKSRSRSKSASRSKSRSRSKSRSRSKSRSRSKSRSRSKSRS
RSRSRSRSKSRSRSKSPSRSRSRSKSKSRSRSRSKSGSRSGSGSRASRSRSRSGSRSRSG
SRNSRPDTPVSRKSVSASDDEN
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggaaatacctttaatgagcaccgacgaggtgattgacctggatccagaacaa
ttaccttccggcgatgaagtgctcagtattttacaacaagaacgctcacaactcaatgtt
tggattaatgttgcactcgcatattacaaacaaaagaaaatcgatgacttcctcaagatc
ctggaagcatcacgtacagatgccaacattgactatcgggatttcgaaagagatcagatg
cgggctctcgacatgttggccgcatactatgtgcaagaagctaacaaagagaagtcaaaa
gataaaaaaaaagaactatttacaaaggcaacattattgtacactatggcggataaaatt
attatgtatgatcagaaccatcttcttggtagagcatatttctgcttattggaaggtgac
aaaatggaacaggctgatgctcagttcaactttgtcctaaatcaatccccaaataatgtg
ccttcattgctcggtaaagcttgcatagctttcaatcgtaaagattacagaggggcactt
gctttttataagaaagcacttagaacaaatccagacagcccagccgctttgagactgggt
atgggacattgttttatgaagctgaataatcaggagaaagccaggatggcctttgaaaga
gctttacaattagatccacaatgtgtaggtgctttagtgggactttccattttaaaatta
aatctgcaggagagtgaatcaaacaaaatagcagttattatgttgtctaaagcctatgct
attgacccaaaaaatcctatggttctaaatcatttggccaatcatttttttttcaaaaag
gactacaacaaagtgcagcatttagctttacatgcctttcacaatactgaaaacgaagcc
atgagagctgagagctgccaccacttggcgagagccttccacgcgcaaggagactgcgat
aaggccttccagtattattatcaagccacacagtttgcgccacctaattttgtacttccc
cattatggactaggacaaatgtatatttacaggggggacacggaaaatgcagcacaatgc
tttgaaaaaatactcaaagctcagcctggtaactacgagacaatgaagatattgggctcg
ttgtacgccaattcgccatcgcaatcaaaacgtgacatcgctcggcaacacttgaagaag
gtcacggaacagtttccagacgacgtggaagcttggatagagttggctcaaatattggag
caaaatgatttacagggttccctaaacgcttacagtactgctatgaaaattttaaaggag
aaagtaaacgctgacataccagccgaaatattaaataatgttgcagccctacattacaga
ttaggaaatttgaatgaagcgaaaaaatatcttgaagaagctcttgaaagagagaaatct
gatgcagaggcattagacgcacaatattacaattcaatagcagtgacgacaatgtacaac
ctggcgaggttgaacgaagctttatgcatgtacaacaaagctgagaaactttataaagac
atactgaaggagcatccaaactatattgattgttatttaaggttaggatgtatggctcgc
gataaaggtcagatatatgaagcttcagattggttcaaagaagctctgaaagtgaacaca
gaacatcctgacacatggtcgttgttgggaaatctccatttggctcaacaagagtggggt
cctggacaaaagaagtttgaaaggattttacagaactcttcaacttccaacgatgcttat
tctctcattgctcttggaaacgtgtggcttcaaacccttcatcagccatgtcgtgagaag
gacagggaaaaaagacatcaagaacgcgccctaacgatgtacaagcaagttttgaaaacc
gatccgaagaacatctgggctgcaaacggaatcggttgtgtgttggctcataagggctgt
ataaacgaagcacgcgacatattcgcacaggtgcgcgaagcgacggcggactttcccgac
gtatggatgaatattgcacatatttacgttgaacaaaaacagtacattaacgccatacag
atgtacgagaactgcatccgcaagttccgcatgcagcacgacgtggagtggctgacgtgg
gtggcgcgcgcgcaggggctggcggggcgggcgcggtgcgcgcggggggcgctgctgcgg
gcgcgccgcgtggcgccgcacgaccccgcgctgcagtacaacacggcgctcacgctgcgc
cgccgcgccgccgccgtgctcaaggacgaccgcgccgacctcgcgctcgtgctgcgcgcc
gtgcacgagctgcaggtctcgcacagatacttcgagcggctatcatctgagggcgcggca
gagggcggcgcgggcgcggcggggggcggcccgtggggcggggcggcggtggaggcgcgc
acgtgcgcggacctactgtcgcaggcgcagtggcacgtcgcacgtgcgcgcagacaacac
cacgaggagctgtcgctgcgggacaagcaacgggaacagcgagaggctttccgcaggcaa
caggaagaggagcggcggattcgcgaagaacaacaacagaagagcaccgtcgagatgctc
cagaagcgacaggagtacaaggagaagacgaaaaacgcgctgctgttcaccgagatgccg
gagagcaagccccggggcggggggagggggaggaggagagacgagtacatatcggactcg
cctggaagtgggagcgatcgtccgcctgaagaaaaacgcgaggccaaacagaagaagcgt
aaacgcgaaggcggcgaagggaagaaaggcaagtctaggaagcgcagggagcagcgcggc
tccggcagcgacagcgacccgcccaggaagaagggcaggaaacggggtgaaaagggcatc
ggtcgccgggaacgcgccaaagcgaaagctgcggaagagaagctcagtgcgaagcaacgc
gcaaagatcgtttccaaggagaccatatccacctcggaatccgactcggataattcgaga
aagtcgcgtagccgcagtcgaagtcgcagcaagagcggcagcgggagtccgcccgccgcc
aagggaaggaagaggatcatgtcggcctccgatagcgacagatccagatcaaagtcgaag
agtcgttccaagtctaagtctcgcagccgctctcggtccggctccgggaagagccgctcc
agatccaagagccgatccaagtctaaatctcgttccaggtcaaagagcagatctcgttcg
aaaagccgttcgaggtcgaagagtgcctccaggtcgaagagtcgatccagatccaagagt
cgctccagatccaagagtcgatccagatctaagagtcgatccagatccaagagtcgatcc
agatccaggagtcgctccagatctaagagtcgttctaggtctaagagtccctctagatca
cgatccaggtcaaagagcaaatctcgatcccgttctcgttcgaagagcggttcccggagc
ggatccgggtcacgagcgtcgcgctcgcggtctcgctccgggtcaaggtcgcgatccggg
tcaaggaactcgagacccgacacgcccgtctcaaggaagtccgtatcggctagcgatgac
gaaaattag
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integrated database retrieval system
