Bombyx mandarina (wild silkworm): 114251946
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Entry
114251946 CDS
T05882
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bman
Bombyx mandarina (wild silkworm)
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bman04131
]
114251946
Membrane trafficking [BR:
bman04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
114251946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
Motif
Other DBs
NCBI-GeneID:
114251946
NCBI-ProteinID:
XP_028042194
UniProt:
A0A6J2KPZ1
LinkDB
All DBs
Position
Unknown
AA seq
3295 aa
AA seq
DB search
MFEGAVAGFLNRLLGKYVQDLDTENLNVGIFSGNVNLTDLKLKPEALYELDLPIDVKIGT
IGRISLQIPWTGLYSQPVVVHVEDVLLLVGPAISNSYFDPERERRLTRAAKRKILQDLEA
ESEVLKGPRNFFEHLFTAIVNNIQIYVRNVHVRYEDSISSKDGPLACGLCLQSLSIETTN
SKWKPSVTAQNASTVYQMMRVESLSLYWNPTATTLDDNETANITPVQYYTWKHYMITGLD
KFSMHREDFEFLIKPVTCKVKVLINRSGEARVPRLLLDAVLQDSALQLSRRQYLSIENLI
DSFARIKLNRKYRHLHPGVPLSNDIKKWWRYAFNVVVEQRVRPYTWGAIKKHRDNYNIYK
QTYKSTLRSPNDTELKLDLQKCEDSLPIISVVIAREQAKFELLSQEPDRIEVVETEFDWW
KPSSPTDTEPEESRAHVELCVKTERSKTLWSHLSSPEKKKVCELIGYVEGTSSKDKSKQY
IEHKINLTLANCSFTLMNRSKEVLVVTLTQFLASLETRPSAKAYKLSARAESLVIEGVTS
DGDLVPLLTAEKGTTLTGTNLLAVDFEKNPSNVEADYALCCLLEPVELLYIEHAFTELIN
FFQTHSMTSDELAEEFSHAVIEAGVISRSVLAYAVSRRKVFHLNMDIKGPCIVLPEHGCI
HKSGRVMIMDVSRIIIKSDLQPSNLTLEDATCMELEERLYDRLHAECTCQVLFCDWDDQW
REQRKHGDSELHLIPRIKMQIVFSNSIKKDYRLLPRYKLNISLSSFKLNLSDRIIGYLLD
FCDNLPIPIPNTVPVSFMDSGDYAEDVVDPELMEILESDRVMADPGYSDLVKLRQKIVAA
YLRRNRVSDPSFDKASAKLGFQESEPLFSSTEQSEEDMELFARYVDLPGFDDNVSPSNNI
NTLMRFIIGEIVINLSRSSDQSERPYVMLSIGKVCLDVALMQYGPAVQLSVGQMLLTDKQ
HHSATGQYLELITSSGELLNLIYRKVRADCPEFKSQFHGVEQALVADTGPISFLLHADAL
RTLSKYLLYIYDKIQTRHAINLKKLMVPQTMSLWKYLLSSETDPPVPPGATKFSYSVRAT
SVSIKLCHLDCSLLEIKLTGFDSDCVFRANDRMIFKLFLSSLQLDDLSESTLYPKLVWPD
EDKVLEVKYVRCAPRVYGSHDDIKAHGELRMYVGRLHVVVFCCLIYQLQQFMEPLVPNSV
ASEVAHAAERAAEKHVQELRSAPTRLNLVIEIHAPVLLLPQKPSSPNLLVLNLGDLQIEN
FFKKMKTVQDASSPMQQPVIDNILMKLVNVTISRAVMTLAGTLEVQEPILEPVRVSCDIE
RCVASAPRDQLALNAHVTTQALSLNLGQNDLATILAVWTDNLSEGRYIGSLIPSSPMDPS
STDASVKKLQEFFAQGEPVRKEAVVRFILEGIELKLFSDMDEVLSSPVRDMNHGLAKLTA
GEATLQLEYSSDGSLELNASLQSLLLEDIRPEPVLIKRIFECEGGCGEGGAGVVVRRAAL
AEVCARAAGGARHLDLRLDRTRLNLAAPFLLTLARALLLALPGEKTMDGGVVNHGYVADS
HPSKPGNNNKTRFPSSSDSTSGYFSTANSVTEEAPGLSISIQLRQPEVMFFTDLTKTEGH
ALLLRTELLIDYSCHSNSESLVVSLAGLQMMSKLQSKLKNLPPQMVLKPCDVEFSKIFKN
PEEGVMVQLKMSEIELHVAATTVHTVVDIIEEVTTELTVPDEKELFNFATYNTKIEKQDE
DLWSPKKLTPYLTLQSDDSYVQPQYTGTKPTETFQMTVSSVRILFEMEHSVRLPVIMVKL
TADVSLYNWSHQFHGTAAASIHATCYNERLDVWEPLIEPVVVDENVYRPWEIRATLFQSK
AYPMSSRLEASETETECDSPFATKPQKTKKRSGFESETSADECDTDNEMTFIRNPQGRES
KHYNVDFNAGNLSFLGVLDRDESDSDNEGGLMDKLTTAFGHLFTDDSSAEEFSNEEDSSA
HEQSEVEVSDHDDEDKPVTFIDGEVKVKKEAERKSVTLQDPVRENSVDSGLEAESFAEKT
CTYITFEAKDMLNITISPAGARALLALGSACTDRTAVVTAIVADSGTVLCNDIGPGSTVH
LKTRSETDLAGNDRLIAIADYDVDTSRPSTPGCDTSAAELLNEAPLTSKPDNNGITDEWN
CFEGGFPGGELCGTSAPPLSPPPPASPHTLHTKLTDLTLTIKMHDFDNLTILCPQRTATK
LHVLHPSKNSTRYYVVVERSSKYNIRKIVVRSPLQVRNETAYALELFYKKTDLEAVGVDL
IGSLKNPFDDKMRLCVIAPQDTYNVPLYIAYHCKLFLLPSNFERYQTATQGIWWMELAND
LGTPRDMVCPAIDENKDDMIFAMRILTVEGCQSPKINRLIPNYLLRVVPPLAVYNRLPHA
LEVSCLEIGWTARIEAGDRTHVYTMELNKPHKISVKLHYQGTEWCGSFTMSSELTEKNIS
LCNDTGEGEGCRARDAVRAGVRRGECWELFLHAQHWLINKTGLPLQMKSSNSDSVYELTE
EPLLWSDGVGVRSRVGGRPGGRGARIRVRAHLSAWSRPCRLAAGVPGLVVCPHTERRTNY
RILMNVTLSELCPQLTKIVTLLPYFLVFNDTKRHLRFMEENEAADLWFDLAPQQCTPFWP
QTDSMSMHCKYRDSNVVSQHFPITKNHMTVLRMDKGSAISVEVTGGTDKPFTITFRPYAA
GDAPIRIDNLCDDLFLKLHQMDSGQVALLSPYQSMLYTWDDPSKDRKLLWNIYNNKGKGF
IAQFEQDGYGEEKVSFHSVKHSTLVATNSMTSKLSSTLKRLTPKSPEPCSSSSDDSDSSD
LPEALMKTKKMRKDKVIVYWTSYMDGYQRVFALAQDERIAYQYRMRINAEKSNYEVYMSL
SGVSLSVCVQSIHGVKELAYVSITDSLPRWEVNVSHKWKQLSPDLTAWIEDKYSANQNKC
ELKEYIHLDLEKMQMTKPFFAELKRTYNPGLWLQFRKSDTYSYLHLKFQRIQIDNQLQEA
VFPTVLCPAPLPSDVKSNQLKPCLEIVALKQYRPSLNQDVYKYLKLLLQEYSVNLDRGFV
NYVFDLLNHWKVEEKPAVRLRADLALVHMPIPIVAAKSQNNNQKNVIFEYVHLSPVRIAL
SLSSRGYLAEFTATPEQMKLGNKKENRPKLFNSDLLEYLFNSWGSSLCDMKDVVLRMSYL
EVRNAPISGSALLSLAQRHYWIQLVQQFHVLVLGLSVLGNPFARPRLCLGTTDAEATQYY
EPYMGTALDKKSLIVSKHLEETVSSMLGQTVNANNKSTITFEELPRQQTSKRRPG
NT seq
9888 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaggcgctgtggccggttttctgaaccggctgctcgggaaatacgttcaggac
ttggatacggagaaccttaatgtcggcatcttctcggggaatgttaatttgactgacctg
aaactcaaaccagaggcattgtacgaactcgatctcccgattgacgtgaaaattggtacg
atcggtcgcatcagcctgcagatcccgtggactggtctttactctcagcctgttgtggtc
cacgtcgaggacgtactgctgctcgtaggtccagcgatatccaacagctacttcgaccct
gaacgagaaagaaggcttacaagagccgcaaaaagaaaaatactccaggacctagaagcg
gagagtgaggttctgaaaggccctaggaatttcttcgagcatttgttcactgctatcgtg
aataacatacaaatttatgtaagaaatgtacacgtgagatatgaggactcgatcagctcg
aaggatggcccgctggcatgtggactgtgtctgcagagtttgtctatagaaacaacaaat
agcaagtggaagccatctgtgacagctcaaaatgcgtcaacagtttatcaaatgatgcgc
gtggagtcactttcgctatactggaatccgacagccactaccctggacgataacgagaca
gccaacattactcctgtccagtactacacatggaagcactacatgataacgggtcttgac
aaattctccatgcatcgggaagatttcgagttcttaatcaaacctgtgacctgtaaagtt
aaggttttaattaaccggtcgggagaagctcgtgttccacgtctcctgctggatgctgta
ctgcaggatagtgcattacaactgtcgcggcgacagtatttatctatagagaatttgatt
gattctttcgcaagaatcaaattgaatagaaaatatcgtcatcttcaccctggtgtacca
ctctcaaatgacattaaaaagtggtggcgttacgctttcaatgtggtagtagagcaacgc
gtgagaccttacacttggggagcgataaagaaacaccgcgataactataacatatacaaa
caaacgtacaagagcactttgagaagtcccaacgataccgaactgaagttggatctgcag
aaatgtgaagacagtcttcccattatatctgttgtgattgcgcgagaacaggctaaattt
gagcttctgtcacaagaaccagatcgcatagaagtagtggagactgaatttgattggtgg
aagccctcgtctccaaccgataccgagccagaagaatccagagctcatgtggaactatgt
gtcaaaacagagaggagtaagactctctggagccatctctccagccctgaaaagaagaaa
gtctgtgaactgattggttatgttgaagggacatctagtaaagataaatcgaaacagtat
atagaacacaaaataaatttaacactagcgaattgttcatttacgctcatgaacagaagt
aaagaagtgctggttgtgactcttacccagttcttagcctcgttagaaactcgaccttcg
gctaaagcgtataagctgtctgcccgtgccgaaagtctggtgattgaaggcgtaacatca
gatggagatttagtaccactgttgacggctgagaaagggaccacgctgaccggtacaaac
cttctggctgttgatttcgagaagaatccgagtaatgtggaagctgattatgcgctgtgc
tgtttgctagaaccggtcgagttattgtatattgagcatgcctttacagagctgatcaat
ttcttccaaacccactccatgacttccgatgagctggcggaggagttttcgcatgcggtc
atcgaagccggagtcattagcaggtccgtactggcatatgccgtcagccggagaaaggta
ttccacttgaatatggacatcaaaggaccatgtatcgtgctaccagagcatggatgcata
cataagtccggtcgagtgatgataatggacgttagtaggataataataaagtcagatttg
caaccttcaaacttaacgttagaagatgccacctgcatggagctcgaagaacgactgtat
gatagactgcatgctgaatgcacgtgccaggtcctcttttgtgattgggacgatcagtgg
agggagcaaagaaaacacggtgactccgagctgcatctgattccgaggatcaaaatgcaa
atagttttctctaacagcatcaagaaggactacaggttgttgccgagatacaaactaaac
atatcactatctagtttcaaattgaatttatccgatcggataattggctacctgctggat
ttctgtgataacctgccgataccgatacctaacacagtgcctgtttcattcatggactcc
ggcgactatgccgaggatgtggtggatcccgagctaatggaaatattggagtcggaccgt
gttatggcagatcctgggtacagtgatctggttaaactaaggcagaagattgttgctgct
tatttgagaaggaatagggtatcagatccgagttttgacaaggcaagcgcgaaacttggc
ttccaggagtcagagccactgttcagctccacagagcagagcgaagaggacatggagctc
ttcgcgagatacgtggatcttcctggtttcgacgacaatgtgtctccttcaaataacatt
aacactcttatgagatttattattggtgaaatagttattaatttgtcccggtcgagcgat
cagtccgagcgtccatacgtgatgctgagtatcggcaaggtctgcctggacgtggctctg
atgcagtacggccccgcagtccagctctctgtcgggcagatgctgctcaccgacaaacag
catcacagtgctactggccaatacttggagctgatcaccagttctggggaactcttgaat
ttgatttacagaaaggtccgagccgactgtccagagttcaagtcccagttccacggagta
gagcaggctctggtcgccgatactggaccgatctcgtttttgttgcacgctgatgctcta
cgaactttatccaagtatctgctctacatctacgacaaaatccaaactagacatgcaata
aacttgaagaagttgatggtcccgcaaacaatgtccttgtggaagtacctgctgagctcg
gagacggatccgcccgtgccgcctggagccaccaagttcagctattcagtcagagccaca
tcagtatccattaagctgtgccacttggactgctcgttgttggaaatcaaactgactggc
ttcgacagcgactgtgtattccgagccaacgaccggatgatcttcaagctcttcttgagc
tcactgcagcttgacgacttgtctgaatccacgttgtaccctaagttggtgtggcctgat
gaggataaagttctggaagtgaagtacgtacgttgcgccccgcgagtctatgggagtcat
gatgacatcaaggcgcacggagagctgcgcatgtacgtgggcaggctccatgttgtggtt
ttctgctgcttgatatatcagctgcagcaattcatggagccgttagtaccaaattcggtg
gcttctgaagtcgctcatgcagcggagcgagcagcggagaaacacgtacaggaactgaga
tcagctccaacaagactcaacttggttattgagattcacgcgccagtactgctactacca
caaaagccatcatcgccaaacctccttgtactcaatttaggtgaccttcaaatcgagaac
ttcttcaagaagatgaagacagtgcaagacgcgagcagtcccatgcaacagccggtcatc
gacaatattctgatgaagctggtgaacgtgactatctccagggctgtcatgacactcgct
ggaaccttggaagttcaggaaccgatcttggagccggtccgcgttagctgtgacatcgag
cggtgcgtggcgagcgctccgcgggaccagctcgctctgaacgcgcacgtcactacgcag
gccctcagcctcaacctaggacagaatgaccttgccacaatcctggctgtctggaccgac
aaccttagcgaaggacggtatattggaagcttaatacccagttcaccgatggatccttct
tcaactgacgcatccgtcaaaaaacttcaagaatttttcgcacagggagaacctgtgagg
aaggaagctgtcgtcagattcattctcgaaggtatagaactaaaacttttctctgatatg
gatgaagtgctgagttctccggtacgtgatatgaaccacggtctagccaagctgacggcc
ggtgaggcgactctgcagctagagtactcttctgatggaagtctggagttgaatgccagc
cttcagagcctacttcttgaggatattagaccggaaccagtacttattaaaaggatcttc
gagtgtgagggaggatgcggggagggcggcgcgggggtggtggtgcgtcgcgcggcgctg
gcggaggtgtgcgcgcgggcggcgggcggggctcgtcatctcgacctgcgcctcgatcgc
accagactcaacttggcggcacccttcctgctcacgttggcacgtgccttgcttctcgcc
ttgccaggtgaaaaaacgatggatggcggggtcgtgaaccacggctacgtcgccgactct
cacccctcgaagccaggaaacaacaacaagaccaggttcccgagttccagtgactccact
agcggttacttttctacagcaaattcggtgacagaggaagcaccgggcttgtctatctcc
attcagttgaggcagccagaagtgatgttcttcacagacctcacgaagaccgaagggcat
gccttgctgttgaggaccgaactgctaattgactactcttgccattcgaactctgaaagt
ctggtcgtgtcactggctgggttgcagatgatgtcaaaactccagtccaaattaaaaaat
ctccccccacaaatggtgttgaaaccttgcgatgtagagttttccaagatcttcaagaat
ccagaagagggcgtcatggttcagcttaagatgtcggagatagaattacacgtggctgct
accacagttcataccgttgttgacattattgaagaagttacaacagaacttactgtgcct
gacgagaaagaactcttcaactttgcgacctataacactaagatagagaagcaagacgaa
gacctctggtctccaaagaagttgactccatacttgaccttacagtctgatgatagttac
gtccagccacagtataccggaaccaagcccacggaaactttccaaatgactgtttcttct
gtaaggatcttgtttgagatggaacatagtgtgagactgcccgtcattatggttaagctc
acagcagacgtgtcgctgtataactggtcgcatcagtttcacggcacggccgcggcgtct
atacacgcgacctgctacaacgagcgacttgacgtctgggagccgctgatcgaacccgtg
gtcgtggacgagaatgtctatagaccctgggagatcagagccactctgtttcagtcaaaa
gcttacccaatgtcctcgcggctggaggcctcggaaacggaaacagaatgcgactccccg
tttgccaccaaaccccagaaaaccaagaaaagatcaggtttcgaatccgagacctcagct
gacgaatgcgacacggacaatgagatgaccttcatcaggaatcctcaagggagagagagt
aagcactacaatgtggatttcaacgccgggaatttgtcgttcttgggagttctggacaga
gatgaatcggattcagataacgagggtggcttgatggacaagttgaccacggcgttcgga
catttgtttactgatgactccagtgctgaagagttcagtaatgaagaggattcttcagct
cacgagcagagcgaagtggaagtcagtgatcacgatgatgaagacaagcctgtgaccttc
attgatggcgaggtcaaggttaaaaaggaagctgagagaaaaagtgttaccctacaggac
ccggtccgagagaacagcgtggattccggtctcgaagctgagagtttcgccgagaagacc
tgcacttacatcacatttgaagccaaagacatgctgaacatcacgatcagtccagccgga
gcgcgagccttgctggccctcggcagcgcgtgcaccgaccgcaccgctgtggtcactgcc
atcgtcgccgacagtgggactgtgctgtgtaatgatataggtccagggtcaacagtacac
ttgaagacacggtccgaaacagatctggccggcaacgacaggcttatagccatagcggat
tatgacgtagacacaagtcgacccagcacgccaggttgtgatacgtcagcagctgaacta
ctgaacgaggctccactaacatcgaagcctgacaacaacggaataaccgacgaatggaat
tgcttcgaaggcggcttcccgggcggtgagctgtgcgggacgagcgcccccccgctctcc
ccgccgccccccgcctcgccgcacacactgcacaccaaactcacagacctcacacttaca
atcaagatgcacgacttcgataatttgactatcctctgcccgcaaagaacagccaccaag
ctgcacgtgctccatccgagcaagaacagcacccggtactacgtggtcgtggagaggtca
tcaaagtacaacattcggaagatagtggtccggtcacctctacaggtccgaaatgaaaca
gcttacgctctagaattgttttacaagaaaacagatcttgaggctgtcggtgtggacctc
attgggtccctgaagaatccattcgacgacaagatgaggctatgcgtaatcgcgccgcaa
gatacctacaatgttcccctgtacatcgcgtaccactgcaaactgtttctactgccttcc
aacttcgagcgataccagacagccactcaaggtatatggtggatggaactggccaacgat
cttggtacgccgcgagatatggtgtgccctgccatagatgaaaacaaagatgacatgata
tttgccatgcggatcctcactgttgaaggatgccaatccccgaaaataaaccgtctgatc
ccgaactaccttctccgagttgtcccgccgctcgcggtgtacaaccgacttccgcatgct
ttggaagtgagctgtcttgaaataggatggacagcaaggatcgaagccggcgatcgaacg
cacgtatacaccatggagcttaacaagcctcataagatttcggtgaagctacactatcaa
ggaacagaatggtgtggcagttttactatgtcatcagagttaacagagaagaacatatct
ctgtgtaacgacacgggcgagggggagggatgcagggcgcgggacgcggtgcgcgcgggg
gtgcggcgcggggagtgctgggagctattcctgcacgctcagcactggctcatcaataag
acaggactgcctttacagatgaagagcagtaactcggacagcgtgtatgagctgacggag
gagcccctgctctggtcggacggggtgggcgtccggagtcgggtagggggcaggccaggg
ggcaggggtgcccggatccgagtgcgcgcacacctgtcggcgtggtcccggccctgcagg
ctcgccgccggggtaccaggcttggtcgtatgccctcatacagaacgaaggactaactac
aggattctaatgaatgtaaccttatcagagttgtgtccgcaattgacgaagatagtgact
ctcttaccgtatttcctggttttcaacgacacgaagaggcatctccggttcatggaggag
aacgaggccgcagatctctggttcgacctcgccccccaacagtgtacgcctttttggcct
caaacggactcaatgtcgatgcactgcaagtacagggattcgaatgttgtctcacagcac
ttcccaatcacgaagaatcatatgacagtactgaggatggataaagggtcagcgatatcg
gtggaagtaaccggtggcacggacaaaccctttacgatcacgtttagaccctatgctgct
ggtgatgcgccaatcagaatcgataatctatgcgatgatttgttcctcaagttacatcag
atggattccggtcaagtggccctgttaagtccgtatcaatcgatgttgtatacgtgggat
gatccttctaaggacagaaaactgttatggaacatctacaataataagggaaaaggattt
attgcgcaattcgaacaggatggttacggagaagaaaaagtgagtttccattcagtgaaa
cactccaccctggtcgcgacaaacagcatgacctccaaactatcgtctactctaaaacga
ctgacacccaaatcccctgaaccttgctcttcaagcagtgatgactctgacagctccgat
ctacctgaagccctcatgaagaccaagaaaatgagaaaagacaaggtcattgtgtactgg
acgtcctatatggacgggtatcaacgagtgtttgctttggcccaagacgagagaatcgcc
tatcaatatcgaatgagaattaacgctgaaaagagtaattatgaagtttacatgtccctt
tctggggtgagtttatctgtgtgcgttcaaagtattcacggggtcaaggaattggcgtac
gtgagtatcacggactccttgccgagatgggaggtcaatgtcagtcataaatggaaacag
ctgtctccggacttgacggcttggatcgaagataaatacagcgcgaaccaaaacaaatgt
gaattaaaagaatacattcatttggacttggagaagatgcagatgacgaaacctttcttc
gccgagttgaagcgaacgtataacccgggcctgtggttgcaattccgcaagtccgacacg
tactcatatttacatctcaaattccaaaggatacagattgataatcagctgcaagaagct
gtgtttccgactgttctctgtccggctcctttgccttcggatgttaagtcgaatcaatta
aaaccttgcctagaaatcgtggctctgaagcaataccggccctcgctaaaccaagacgtg
tacaagtatctaaagttgctccttcaggagtactccgtgaacttggatcggggtttcgta
aattacgttttcgatttgttaaaccattggaaggtggaagagaagccagctgtgaggctg
agagcagatctggctttagtgcacatgccgatacctattgtggctgccaaaagtcagaac
aataaccagaagaatgttatatttgaatatgttcatctatcgccggtcaggattgctttg
agtttgtcttctagaggatatctagcggaatttactgctactccagaacagatgaagttg
ggtaataaaaaggagaacaggcctaaattattcaatagtgatctattagaatatctattc
aactcatggggttcttcgctttgtgatatgaaggatgttgttttgaggatgtcatatcta
gaagttcgaaacgcgccaatatcaggatcggcgttactctcattggcccagcgccactac
tggatccagctggtgcagcagttccacgtgctggtattaggacttagcgttttgggcaac
ccgttcgctcgaccacggctctgtctggggaccacggatgcggaagcaacgcaatattac
gaaccttatatgggtacagcgttggacaagaaatctttaatagtttcgaagcacctggag
gagaccgtgtcctcgatgctgggacagacggtgaatgcgaacaacaaatctacaatcaca
ttcgaagagctaccgcgacaacagacctccaagagacgaccaggttaa
DBGET
integrated database retrieval system
