Bombyx mandarina (wild silkworm): 114252004
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Entry
114252004 CDS
T05882
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114252004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bman03019
]
114252004
Messenger RNA biogenesis [BR:
bman03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114252004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
114252004
NCBI-ProteinID:
XP_028042268
UniProt:
A0A6J2KL35
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All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MDVTCDIFSKRLIISVLWNIGLQAVIAVMLVGFIQIDILHPVSWISSSINDVFGWKMSIN
IVLLGLVSFFQAYIYGCYYVKPLPKYFTRFSMFLSLFCAQNIIFSILYALSGYFTMSLYS
SLAKSNFNTLKKICENYDGQCLLEQSLFLQMGGMWMGLYYFLNAHIFSPTTLTFPHIYQD
KFQQIKLAIHSILSCGFKSSIIPVVYYCIFYYFWGHKPRNVVSDVYGLYLEDKPLDNILN
LFGSGIWIGLWFYTSLFLISVYAMRTVFNIVLTEPMKFPIESSKKLTLHKAIAQKSQFNG
YLGTQDLKIMSLTDTVRRKEIFTLSQPGGHPRNWNNLLQECLKIVNDFSKELDSINGDMK
PVEIEMLPKRPGSSITPKSTLYTGNLRNMAYSPQLHELKEHNKNKSEHTLISAIKEEFNI
LVQRIRQKPGISYLFGELTDTRLKFLLMQAQPVMWTCEGLAFIAAASLKEDKYGVVQTDL
PIVISTLINLKQNLDKLTKPGLVPRKHILNDSFALKMKSALLSSVKLSIYKIVITFSKYI
HEIPLDPDVQIAIQPFLICKEA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaacgtgtgatattttttcaaaaagacttattatatctgttttgtggaatata
ggactgcaagctgttattgctgttatgttggtgggtttcatacaaattgatattcttcat
cccgtatcctggatatcgtcatctataaatgatgtatttggctggaaaatgagcataaat
atcgtattgcttggactcgtgtctttttttcaggcttatatttacggctgctattacgta
aagccactaccaaagtattttaccaggttttctatgttcctgagtttattttgcgctcaa
aatattatatttagcattctgtacgccctgagtggctatttcactatgagtctctattct
tcattggcaaaaagtaattttaatacattaaagaaaatatgtgagaattatgatggacaa
tgtctcttagaacaaagcttattcctacaaatgggtggcatgtggatgggcttgtattat
tttcttaacgctcatatattcagccccacaaccctgacatttccacatatttatcaagac
aagtttcaacagattaaattagccatccacagtattttgtcatgtggttttaaaagctct
attattcctgtggtttattattgcattttttattacttttggggccataaaccaagaaat
gtagtcagcgatgtttatggtttgtacttggaagataaacctcttgataatatattaaac
ttgtttggatctggtatatggattggactttggttttacaccagcttatttttgatatct
gtgtatgccatgagaactgttttcaatatagtattaacggagccaatgaagtttccaata
gagtctagtaaaaaattaactttgcacaaggcaattgctcagaaatcacaatttaatggg
tatttagggacacaagatctgaaaattatgtctctgactgacactgtgagaaggaaagag
attttcacactatcacaaccaggaggacaccctcgaaattggaataacctgctacaagaa
tgtttgaagattgtaaatgattttagcaaagaattggatagcataaatggtgatatgaaa
ccagttgaaatagaaatgttgccaaaaagaccaggatcaagcatcacaccaaagtctaca
ttgtatacgggaaacttgagaaatatggcatattctccacaattacatgaattgaaagaa
cacaataaaaataaaagtgaacatactctcatcagtgctataaaagaggagtttaatatt
ctagtacaaagaattcgccaaaaaccaggcattagttatttatttggggagctgactgat
acaagattaaagttcttattgatgcaagcacagccagtgatgtggacttgtgagggactt
gcttttattgcagctgcatcactgaaagaagacaaatatggtgttgtgcaaactgatttg
ccaattgtaatatcaactttaataaatttaaaacaaaacttagataaattaacaaaacct
ggtcttgtcccaaggaaacacatcttgaatgattcttttgctttaaaaatgaaatcagct
ttgttatcttcagtaaaattaagcatttataagatagtgataactttttcgaagtatata
catgaaattccattagatcctgatgtgcaaatagcaatacaaccttttttaatatgtaaa
gaagcttga
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