Bombyx mandarina (wild silkworm): 114252566
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Entry
114252566 CDS
T05882
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114252566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bman03036
]
114252566
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
114252566
REST complex
114252566
Heterochromatin formation proteins
Other heterochromatin formation proteins
114252566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3_corepress
Sin3a_C
PAH
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114252566
NCBI-ProteinID:
XP_028042897
UniProt:
A0A6J2KPK7
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MMKRTGVPRLGPDEPSPLQAQNAAQLQQAGASSLHSLAQPHSQPILNSNALVSVGGFGRG
SRGAAPVLGYMKPGALQYAPPKQPPPQMTPRIKAVQPPVPPAQPPAAPPQAGGGVAAPPA
GAQSPGPQTQFQRLKVEDALSYLDQVKYKFNTQPQVYNDFLDIMKEFKSQTIDTPGVITR
VSNLFKGHPELIVGFNTFLPPGYKIEVQSNGQVSVSMPSPTAIGSGVLLGVHHTQQPQLV
HLLPVPHAEECRPVGPALQHLSHAAPDPALHHATGPPVTPTPTAPPGQPVEFNHAIEYVN
KIKSRFSRQPDKYKRFLEILHAYQRGHRDLKEPQAKQQTEQEVYSQVAKLFEHQEDLLAE
FGQFLPDAKAVTKPEPAHEHHPQFSPGQPPREVEPERFAPAVQPEPAPMHLQHALVPKHV
TTPPAVVQHPQHHHLKRSPSISSTGQPSSAPPPAKKPRASCLSGATVRDVSYSEAAKLAT
IHDYSFFERARKALRSQQVYDNFLRCLLLFTNEIISSSELLSVTSPFLCRHPELQRWLHD
FVGPPSPPHTPTHTPNTGYPWTNPIPVEPRPRYESVGALGAQMRNDRPQGDMAMDIDLST
CKRLGTSYCALPREAAARKCSGRTPLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEYIY
RCEDERFELDVVIETNAATIRVLEGVQKKLSRMSGEDAARYRLDDCLGGHSPTVHQRALR
RIYGDKAVDIIAGLKKNPVVAVPVVLRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLD
HQGINFKQNDLKAMRSKTLFNEVESAYAARRPGPHLVVDYNMQSRQEAIKIVRDTAELLI
HHARRQTAIQKAEKRRIKQLLRHFLPDLFSHPRQPLSDDEKDEVSNTIGIVLEDKEDAPS
PECPIDQQGQENDKNNLKQEIKQESSESDNASDKSGKNGKNNKENKPKNNNNLESNKESV
LTQPTNGKRLSNDDQILKSDLKTEPFEVEDDLRDHPPNEGRFVCTSSWYLFLRVHGALCQ
RLAAARRAMSAAPPARPRHDRPPALALRLAPAHHLPADVSSPTEYYNLLLDLVKGVLDGN
MESSAFEDAAREMLGIKAYPAYTLDKLVSIAVRQLQHCASEPWSVRAAELCARDMRAAAG
PYVRRALAALRPHHAAFLVRAYGGDECKVTFELLESAGEGRTSPHNNDNRMSPTAQVGFY
FSDYLNIYVLNDTWVSFPTWSEDSTFVTSRKTQYEEYIYRCEDERFELDVVIETNAATIR
VLEGVQKKLSRMSGEDAARYRLDDCLGGHSPTVHQRALRRIYGDKVAVDIIAGLKKNPVV
AVPVVLRRLKAKEEEWREAQKGFNKQWREQNEKYYLKSLDHQGINFKQNDLKAMRSKTLF
NEVESAYAARRPGPHLVVDYNMQSRQEAIKIVRDTAELLIHHARRQTAIQKAEKRRIKQL
LRHFLPDLFSHPRQPLSDDEKDEVSNTIGIVLEDKEDAPSPECPIDQQGQENDKNNLKQE
IKQESSESDNASDKSGKNGKNNKENKPKNNNNLESNKESVLTQPTNGKRLSNDDQILKSD
LKTEPFEVEDDLRDHPPNEGRFVCTSSWYLFLRVHGALCQRLAAARRAMCAAPPARPRHD
RPPALALRLAPAHHLPADVSSPTEYYNLLLDLVKGVLDGNMESSAFEDAAREMLGIKAYP
AYTLDKLVSIAVRQLQHCASEPWSVRAAELCARDMRAAAGPYVRRALAALRPHHAAFLVR
AYGGDECKVTFELLESAGEGRTSPHNNDNRMSPTAQRTSGGVGGVKSVGEGEAVSRCAAW
SLYAERFASNKTSGVTARGKPVFLARNARARGLHAPANTSRWPQPPRRPAPRRKPAAHDA
AECTLAELRCRLVACRPFRLLQRGALAAARATHERLSRRRRDRFRAWLDANRPHLDERLS
I
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgcacgggcgtaccccggctcggtcctgatgaaccgtcacctttgcaggcc
cagaatgcagcccagctacaacaagcaggcgccagtagtcttcattcgctggcacaacca
cacagccaacctatattaaactcgaacgcgctggtgtcagttggagggttcggtcggggc
tctcggggggcggcccccgtgctgggctacatgaagccgggcgcgttgcagtacgcgccc
cccaaacaaccgccaccgcagatgacgcccaggatcaaggccgtgcagcccccggtgccg
cccgcgcagccccccgcggcgcccccgcaggccggcggcggcgtggcggccccccccgca
ggcgcgcagtcccccggcccgcagacgcagttccagcggctcaaggtggaggacgcgctc
tcctacctcgaccaggtcaagtacaagttcaacacgcagccgcaggtctacaacgacttc
ctcgacatcatgaaggagtttaagagtcaaacaatcgatacgccgggagtcatcacccgg
gtatcgaacctgttcaaggggcatccggagctgattgtgggcttcaacactttcctacct
cccgggtacaagattgaagttcagagtaatggccaggtgtcagtatcgatgccgtcgccg
acggccattggcagcggcgtcctgctgggagtacatcacacgcagcaaccgcagctagtt
cacttgttacctgttccgcatgcagaggagtgtcgtcccgtcgggccggcgctgcagcac
ctgtcccacgccgcgcccgaccccgccctgcaccacgccaccgggcccccggtcaccccg
acgccgactgctccccccggacaaccagtcgaattcaatcacgccattgaatacgttaac
aagataaagtcccgtttttcccgtcaaccggacaagtacaagcgtttcctggagatactg
cacgcgtaccagcgcggacaccgcgacctcaaggagcctcaagctaaacaacaaacggag
caagaggtttactcgcaggtggctaaactatttgaacatcaagaggatctgctggcggag
ttcggccagttcttgccggacgctaaggccgttaccaagccagagcctgcccatgaacat
catcctcagttttctccgggtcaaccgccgcgtgaggtggagcccgagcgctttgccccc
gccgtgcagccagaacctgctccaatgcacttacagcacgctctagttccaaagcatgtg
actaccccgccggctgtggtacagcatccgcagcatcatcacctcaagagatctccgagt
atctcatcgacaggtcaaccgtcgtcagccccgccgcccgccaagaagccgcgcgcgtcg
tgcttgtcgggcgccacggtgcgcgacgtgtcgtactcggaggcggccaagctggccacc
atccacgactacagcttcttcgagcgggccaggaaggcgttgcgctcgcagcaagtctac
gataactttttaagatgcctgctcctgttcacgaacgaaataatatcatcgtcggagtta
ttgtcagtgacgagtccgttcctgtgccgccacccggagctgcagcgctggctgcacgac
ttcgtgggcccgccctcgccgccgcacacccccacccacacccctaatacgggctaccct
tggaccaaccctataccggtggagccccgccctcggtacgagagtgtcggcgccctcggg
gcacagatgcgaaatgatcgcccccaaggagacatggcaatggatattgatctatcgacg
tgcaagcgtctcggcacgtcgtactgcgcgttacctcgcgaggcggccgccaggaaatgc
tcgggacgaacgccgctctgtaaagaagtacttaatgatacatgggtgtcgttcccgaca
tggagtgaagactcgacattcgtaacatcaagaaaaacccagtatgaagaatacatttac
cgttgtgaagatgagaggtttgagctggacgtggttatagaaacaaacgccgccaccatc
cgagtgttggagggcgtgcagaagaagttgtcccgcatgtcgggcgaggacgcggcgcgg
taccggctggacgactgtctcggcggacactcgcccaccgtgcaccagagggcgctgcga
cgcatctacggcgacaaggcagtggacatcattgcaggcctaaagaaaaaccccgttgtg
gctgtacctgttgtactgaggaggttgaaagctaaagaggaagaatggagagaggctcag
aagggcttcaacaaacagtggcgtgaacaaaacgaaaagtattatttgaaatctctcgac
catcaagggatcaacttcaagcagaacgatctgaaggcgatgcgctcgaagacattgttc
aacgaggtagagagcgcctacgcggcccgccgcccgggaccgcacctcgtggtcgactac
aacatgcagagccgacaggaagcaataaaaatagttcgggacaccgcggagctccttata
catcacgccaggagacaaactgctatacagaaggctgagaaacggagaatcaaacagttg
ttaaggcatttcctacccgatctcttctcgcatccacggcagccgctatctgatgatgag
aaggacgaagtatcaaacaccattggtattgtcctagaagacaaggaggatgcaccgagc
ccggagtgtccaatcgatcaacagggtcaagaaaatgacaagaataatttaaaacaagaa
attaaacaagagtcatctgaatctgataacgcgtcagacaaaagcggcaagaacggaaag
aataacaaagagaataaacccaaaaataataataatttggagagcaataaagaaagtgta
ctaacccagccgactaatggaaagaggttaagcaatgatgatcaaatactgaaatctgac
ttaaagactgaaccattcgaagtagaagatgatctcagggatcacccccctaatgagggc
aggttcgtgtgcacgtcctcgtggtacctgttcctgcgcgtgcacggcgcgctgtgccag
cggctggcggccgcgcgccgggccatgtccgccgcgccgcccgcccgcccgcggcacgac
cgcccccccgcgctcgccctgcgactcgcgcccgcacaccatttgccagcggacgtgtcg
tcgccaacagaatactacaacttgttgctggacctggtgaagggcgtcctcgacggcaac
atggaatcttccgccttcgaggatgcagcccgagaaatgctcgggatcaaagcctatccg
gcctacacgctggacaaactggtgtctatcgctgtcaggcagctgcagcactgcgcgtcg
gagccgtggtcggtgcgcgcggccgagctgtgcgcgcgcgacatgcgggccgccgccggg
ccctacgtgcgccgcgccctcgccgcgctgcgcccgcaccacgccgccttcctcgtgcga
gcgtacggtggagacgagtgtaaagtaacatttgagctgctagaaagcgctggagaagga
aggacgtccccacacaacaacgacaacagaatgtcaccgacagcacaggtaggtttttat
ttttcagactatctaaatatttatgtacttaatgatacatgggtgtcgttcccgacatgg
agtgaagactcgacattcgtaacatcaagaaaaacccagtatgaagaatacatttaccgt
tgtgaagatgagaggtttgagctggacgtggttatagaaacaaacgccgccaccatccga
gtgttggagggcgtacagaagaagttgtcccgcatgtcgggcgaggacgcggcgcggtac
cggctggacgactgtctcggcggacactcgcccaccgtgcaccagagggcgctgcgacgc
atctacggcgacaaggtggcagtggacatcattgcaggcctaaagaagaaccccgttgtg
gctgtacctgttgtattgaggaggttgaaagctaaagaggaagaatggagagaggctcag
aagggcttcaacaaacagtggcgtgaacaaaacgaaaagtattatctgaagtctctcgac
catcaagggatcaacttcaagcagaacgatctgaaggcgatgcgctcaaagacattgttc
aacgaggtagagagcgcttacgcggcccgccgtccgggaccgcacctcgtggtcgactac
aacatgcagagccgacaggaagcaataaaaatagttcgggacaccgcggagctccttata
catcacgccaggagacaaactgctatacagaaggctgagaaacggagaatcaaacagttg
ttaaggcatttcctacccgatctcttctcgcatccacggcagccgctatctgatgatgag
aaggacgaagtatcaaacaccattggtattgtcctagaagacaaggaggatgcaccgagc
ccggagtgtccgattgatcaacagggtcaagaaaatgacaagaataatttaaaacaagaa
attaaacaagagtcatctgaatctgataacgcgtcagacaagagcggcaagaacggaaag
aataacaaagagaataaacccaaaaataataataatttggagagcaataaagaaagtgta
ctaacccagccgactaatggaaagaggttaagcaatgatgatcaaatactgaaatctgac
ttaaagactgaaccattcgaagtagaagatgatctcagggatcacccccctaatgagggc
aggttcgtgtgcacgtcctcgtggtacctgttcctgcgcgtgcacggcgcgctgtgccag
cggctggcggccgcgcgccgggccatgtgcgccgcgccgcccgcccgcccgcgacacgac
cgcccccccgcgctcgccctgcgcctcgcgcccgcacaccatttgccagcggacgtgtcg
tcgccaacggaatattacaacttattgttggatttggtgaaaggcgtcctcgacggcaac
atggagtcttcagccttcgaggatgcagcccgagaaatgctcgggatcaaggcttatccg
gcctacacgctggacaaactggtgtctatcgctgttagacagctgcagcactgcgcgtcg
gagccgtggtcggtgcgcgcggccgagctgtgcgcgcgcgacatgcgggccgcggccggg
ccctacgtgcgccgcgccctcgccgcgctgcgcccgcaccacgccgccttcctcgtgcga
gcgtacggtggagacgagtgtaaagtaacatttgagctgctagaaagcgctggagaagga
aggacgtccccacacaacaacgacaacagaatgtcaccgacagcacagcgcacgagtgga
ggcgtgggcggagtgaaaagtgtcggcgaaggcgaggcggtgtcccggtgcgcggcctgg
tccctgtacgccgagcggttcgccagcaacaagaccagcggcgtgacggcgcgcggcaag
cccgtgttcctggcgcgcaacgcacgcgcacgcggcctgcacgcgcccgccaacacgtcg
cgctggccgcagccgccgcgccgccccgccccgcgccgcaagcccgccgcgcacgacgcc
gccgagtgcacgctcgccgagctgcgctgccggctcgtggcctgccgccccttccgcctg
ctgcagcgcggagccctggccgccgcgcgcgccacgcacgagcgcctcagccgccgccgc
cgcgaccgcttccgggcctggctggacgccaaccgaccgcacctagacgagcgcctctct
atctaa
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