Bombyx mandarina (wild silkworm): 114252604
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Entry
114252604 CDS
T05882
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114252604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bman03400
]
114252604
Enzymes [BR:
bman01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
114252604
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
114252604
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
114252604
NCBI-ProteinID:
XP_028042955
UniProt:
A0A6J2KLF4
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MAPRSAKAKKAAEAKVADNDAPKKGRGKAKVVEDPETESVEAEVDEKNIVSEKKTKRGRK
AAGDTNGQDENGKIEETVQAPKKGRKKNVEEPPVENKSTDEPSVEDEVALSEENNPSEDG
SETNGHIEEEQVPSGRGRKKQTKKEVKKPEPRTGRGRKPKQEIEDEVEDKPKGRGRGRKA
KAEEAESDISETVEDEGKPEAAKGKKKVQNQAVEKPAENDDDEVEEENVEEPKKKETKSR
KNQGKKVAAKEETDDAVREDEPASKKRKVTKKDEKQKAAQNEDDNVDEEEKPEPKPAKGR
RGQKKAEVSAESHEEPQDTGEPTTKRRRKPVEEKVNTEDAKKKAPPKNKSTTNYEDIDFT
NESKTTQGKEWNFKIASWNVDGIRAWMSKGGLDYIKYEKPDIFCLQETKCATDKLPDEVA
NVPGYHAYWLAGDKDGYAGVGIYTTKLAMNVKYGLQNEELDDEGRIITAEYEQFYLICTY
VPNAGRKLVTMPKRLRWNEEFLKHVKELDKKKPVIICGDMNVSHKEIDLANPKTNRKNAG
FTDEERAGMTQLLGDGFVDTFRHFHPDQTGSYTFWTYMMNSRSKNVGWRLDYFIVSDRLI
PSVCDNVIRDKVYGSDHCPIALFLNLTTAEKPKE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaagatcagcaaaagctaagaaagcagcagaagcaaaagtagcagacaatgat
gcacctaaaaaaggaagaggcaaagcaaaagtagttgaagatcctgaaactgagtctgta
gaagctgaagttgatgaaaagaacattgtatctgaaaagaaaaccaaacgcggaaggaaa
gctgccggtgacacaaatggacaagatgagaatggtaaaatagaggaaacagtccaagca
ccaaaaaaaggaaggaagaagaatgtagaggaacctccggtggaaaataaatctactgat
gaaccctcagttgaagatgaagtggcattgtctgaggaaaataatcctagtgaagatggt
tcagaaacaaatggtcacatagaagaagaacaagttccttcaggtaggggacgtaagaaa
caaaccaaaaaggaagttaaaaaaccagagcctagaacaggcagaggtaggaaacctaaa
caagaaatagaagatgaagttgaagacaaaccaaaaggtaggggcagaggacgcaaagcc
aaagctgaagaagctgagtctgatatatctgaaactgttgaggatgaaggaaagccagaa
gctgctaaaggcaagaagaaagttcagaaccaagctgttgagaagcctgcagagaatgat
gatgatgaagtagaagaggaaaatgtagaggaaccaaaaaagaaggaaaccaaaagtcgc
aaaaatcagggcaaaaaagtagctgccaaagaagagactgatgatgctgtgagggaagat
gaaccagcttctaagaaaaggaaggtcacaaaaaaagatgaaaaacaaaaagctgcacaa
aatgaagacgataatgttgatgaagaggaaaaacctgaaccaaagcctgcaaaaggaagg
cggggtcaaaagaaggcagaagtatctgctgaatcccatgaggagccacaggacactggt
gagccaactacaaaacgtcgacgcaagcctgtcgaagaaaaggtgaacaccgaagacgcg
aaaaagaaagcaccgcccaagaataaatccacgacaaattacgaagatattgactttaca
aatgaatcgaagacgacgcaaggcaaagaatggaacttcaagatagcgagttggaacgtt
gacgggatcagagcgtggatgagcaaaggaggcttggattacattaaatacgagaagccg
gacattttctgtttgcaagagacgaaatgtgcaacggacaaattgccagacgaggtggct
aatgttccgggctatcatgcgtactggttggccggggacaaagatggctacgcaggcgta
ggcatctacacgacaaagctagcgatgaacgttaaatatggcttgcaaaacgaagagctg
gacgatgaaggtcgcattataacggcggagtacgaacagttttacttgatttgtacgtac
gtaccgaacgcgggccggaaactagtcacaatgcccaaaaggctgcgatggaacgaggaa
ttcctcaaacacgtcaaagaattagataagaagaaacctgtgataatatgcggcgacatg
aacgtttcccataaggaaatcgatttagcgaatccgaagacgaacagaaagaatgccggc
ttcacggacgaggagcgcgccggcatgacgcagctgctcggcgacgggttcgtcgacacc
ttccgacatttccaccccgaccagacgggctcatacaccttctggacgtacatgatgaat
tcccgttcgaagaacgtcggatggcgtttggactacttcatagtttccgacagactgatt
ccgtcggtctgcgacaacgtcatccgcgacaaggtgtacggcagcgaccactgtccgata
gcgctctttctaaatctaacaacagccgagaaaccgaaggaataa
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