Bombyx mandarina (wild silkworm): 114252746
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Entry
114252746 CDS
T05882
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114252746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114252746
03036 Chromosome and associated proteins [BR:
bman03036
]
114252746
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114252746
Coactivators
SAGA/TFTC/STAGA complex
114252746
Chromosome and associated proteins [BR:
bman03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114252746
STAGA complex
114252746
TFTC complex
114252746
SAGA complex
114252746
SLIK complex
114252746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
RhoGAP
VPS8_N
Beta-prop_Nup120_160
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
114252746
NCBI-ProteinID:
XP_028043163
UniProt:
A0A6J2KNR1
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MSEKSTPLLAVLQLLRKYNLKSTEDILRKEASLGDVECESLDLPEVELASILTAHHTESD
PFTYELAYDGLKKFIENSLDLYKYELSTLLYPVFVHMYLLLILYDHVEHAVSFLEKFGIE
QEDYYQEDLKKLSIVKHKDQIKGNELAEIYSTNKFTVQLSRDASSQLKRYLHEQKNSSVI
INIINNHIQIEVHDGPGRTQAQVRATAGGVLGEPMKSENRTKVYYGLLKEPDIQVLPAPV
EDEEEVEETPDKPKKKKAKKDNLFMKKPKSDPNAPPNDRIPLPDLKEIDKVEKGKALREA
SKRVQLGPDSLPSICFYTLLNSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGM
KSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTV
RLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHHLPLRIFIGHY
SDVDCIQFHPNSNYIATGSSDRTVRLWDCLTGSQVRIMTGHKSTIFTLAFSVCGRWIASG
GSGGDMMVWDLSTGGPAASLPPAHTAPIHALAFSRDGTVLSSGSLDCTIKLWDFTAITDE
SPIEETLNNLIPKEDKYLLQSFATKSSPVKGLHFTRRNLLLAVGTYESSA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaaatcaaccccactgctggctgttttacagttacttagaaagtacaatcta
aagagtacagaagacattttaagaaaagaagctagtctaggagacgtcgaatgtgaaagc
ttagatcttcctgaagtagaactagcgagcattcttaccgctcatcacactgaaagcgac
ccctttacgtacgaattggcgtacgacggtctaaaaaaatttattgaaaattctttagat
ttgtacaagtatgaattgtccacactattgtatcctgtgtttgttcacatgtatcttctg
ttgatactgtatgatcatgttgaacacgctgtcagtttcttggaaaagtttggaatagaa
caagaagattactatcaagaggacttgaaaaagttgtctattgtaaaacataaggatcag
ataaaaggaaatgaactagcagaaatatacagcacaaataaatttacagttcagttatca
agagatgcatcttcacaactgaaacgttacttacacgaacagaaaaattcctcagtaata
ataaatataataaataatcatatacaaatcgaagtccatgatggtccaggaagaactcaa
gcacaagttcgagctacagctggaggggtacttggagaaccaatgaaaagtgaaaatcgc
accaaagtgtattatgggctcctgaaagagcccgatattcaagttctaccggctccggta
gaagacgaagaagaagtagaagaaacccctgacaaaccaaaaaagaaaaaagcgaaaaaa
gataatctttttatgaagaaaccaaaatctgacccaaatgcacctcctaatgacaggatc
cctctaccagatctaaaagaaattgataaagtagagaaaggcaaagcactcagagaagca
tcaaaacgtgttcagctaggaccagacagcttgccctctatttgtttctatacattactg
aacagcggacatactgcaattagttgtgatatttgtgacgattccacccttttggctgtg
ggatttaataactcaaacataaaggtatggacattgactcccattaaactgcgaggaatg
aaatctgcagaaaaactacaagatatagacagggaagcaggtgatgtactcgtgaggatg
atggaggaaaaggaccgtgatacgtgccgcaacctttttgggcactccggccccgtttat
aaagttgcatttgatccttttaaaacaatgctgctttcgtgctctgaggatacaactgtg
agattgtggtcactacagtgttggacgtgtcttgttgtataccgtggacacgtatggccg
gtctgggacgtgcgctggtcccctcatggccactactttgcttccagcggccatgatcgt
actgctcgactatgggcgactgatcaccaccttccactgaggatatttataggacattat
tcggatgtagattgtattcagtttcacccgaactcaaattatatagcaactggatctagc
gacagaacagttcgactgtgggattgtttaactggtagtcaagttcgaataatgacagga
cataagtcaaccattttcacgttggccttttccgtttgtggaagatggattgcttctggt
ggcagtggtggagatatgatggtttgggatttatctactgggggtccagccgcttcgtta
cccccggcacatactgctcccatacacgccttagccttcagtcgtgatggaacagttcta
tcgtcaggctcattggattgtacaataaaattgtgggacttcacagccataacagacgaa
tctcccattgaagaaactctaaataaccttataccaaaagaagacaaatatctattacaa
tcatttgccactaaaagttcccctgtaaaaggcttgcattttacaagacgcaatttacta
cttgctgttggcacatatgagagcagtgcttaa
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integrated database retrieval system
