Burkholderia mallei BMQ: DM76_4331
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Entry
DM76_4331 CDS
T03490
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bmaq
Burkholderia mallei BMQ
Pathway
bmaq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bmaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DM76_4331 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmaq03400
]
DM76_4331 (uvrA)
DNA repair and recombination proteins [BR:
bmaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM76_4331 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM76_4331 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
AAA_29
AAA_21
SMC_N
AAA_16
nSTAND1
RsgA_GTPase
AAA_33
AAA_22
AAA_25
AAA_23
NACHT
Viral_helicase1
AAA_18
UvrA_DNA-bind
nSTAND3
ATPase
DnaJ_CXXCXGXG
DUF4350
RNA12
Motif
Other DBs
NCBI-ProteinID:
AIO61408
UniProt:
A0AAX1X9W0
LinkDB
All DBs
Position
2:complement(1358311..1364223)
Genome browser
AA seq
1970 aa
AA seq
DB search
MSSSNLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF
SAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE
LFDRRTARLVRHDTPETIYADLFARTQAHDPRIAITFAVELPENASDEEVEQWLSASGYT
RVQARRDVASPTGPRKVLDVVADRFRLHQIDKARAIEAIEASLKRGGGRVSIYVLAQAPE
GADGGAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACETCRGFGRVIGVDLGL
VIPDARKTLRGGAVKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPAEQDWVINGSS
DWNGKWQSQWYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCAVCGGARLKTEALLWRLG
TKANADAVLASADRFMPRGVDWTRAQLEALPGLTVHDLMLLPIERIRRFFDDISLPSALL
DDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVL
DEPSIGLHPRDLNRIVEAMRRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGTIV
YDGTPGAIRSARTLTGEYLGGRKHVAHASNWARRPVDARTPRIVLEGASEHNLRDVTVEI
PLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGKATESPGAYRRLAGAEQVGDVVFVDQS
PIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYSAGTFSFNSGDGRCPSCGGSGFEHI
EMQFLSDVYLRCPDCDGSRYRAEILEVRIERGGRALSVADVLDLTVSEAAACFAADADVL
RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKARDGRRVVTEEARVARAR
LFMFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAADWLIDLGPEGGDGG
GLVLCAGTPDDVKACAGSHTGAALLQYERAMNVGADADASGDAGVPLQAALNAARARRAI
EGENVVRIVNAREHNLKALDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLN
AYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQ
HCIHDGTPVTSQTVESIAAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLR
VDGEFVTVDPWPKLDRFREHTIELPVADLVVSPDNEAELRQRLDETLELGKGVMHLLAPL
DGLRHAMDNRLCTAGVGAIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTGL
ALTREQRAAYDDTVLAEDGRGREQTLPSDEQEPEGVGDEPCPDCGGTRLNPSARAVTFGR
HSIVDVAQWTVTDTRRWIEGLQLAGRDAQIARDIVGEIGSRLAFLEEVGLGYLSLDRAAP
SLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLSALRKLGDKGNTLVVEH
DEDTIRRADHIIDIGPGAGRRGGTLVAQGGVADLSAQSASVTGRLLAQPMTHPLQPRRSV
NPPGKRNGHAVPQAWLTVHRARLHNLRDVTVGMPLARLVAVTGVSGSGKSTLARDVLMTN
LLDAVGRSVLSSPAARRARKAAQQDAPRAAKSRASVLARSAPRPVLNVTHAWQGCESISG
WEHIDRVLEVDQTPIGKTPRSCPATYIGVWDAIRRLFADTLEARARGYTASRFSFNTGEG
RCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAVE
FFAPLSNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQKA
PHTLYVLDEPTVGLHMADVAKLIRVLHRLVDAGHSVVVIEHDLDVIAEADWIVDLGPEGG
AGGGTIVAAAPPEGLVEVSASHTGRALGAVLARTGADRDEPLRSGTARAG
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatccagcaatctgatccgcattcgcggagcacgtcagcacaatctcaagcatatc
gatctcgacctgcgcaccggcgaaatgacggtcgtcaccggcccgtcgggctccggcaag
tcgagcctcgtgttcgacaccctgtacgcggagggccagcggcgctacgtcgagaccttc
agcgcgtatgcgcggcagtttctcgaccggatggaccgcccgcaggtggagcgcgtcgac
ggcgtgccgcccgcgatcgcgatcgaccagacgaaccccgtgcgcagctcgcgctcgacc
gtcggcacgatgaccgagctcaacgatcatctgaagctcctgtacgcgcgcgcggccgag
ctgttcgatcgccggaccgcgcggctggtgcggcacgacacgccggagacgatctatgcg
gatctcttcgcgcgcacgcaggcgcacgacccgcgcatcgcgatcacgttcgccgtcgaa
ctgccggaaaacgcgtccgacgaggaagtcgagcagtggctgtcggcgagcggctatacg
cgcgtgcaggcgcggcgcgacgtcgcgtcgcccaccgggccgcgcaaggtgctcgacgtg
gtggccgaccgcttccggctgcatcagatcgacaaggcccgcgcgatcgaggcgatcgag
gcgtcgctcaagcgcggcggcgggcgggtgagcatctatgtgctcgcgcaggcgccggaa
ggcgcggacggcggcgcggcacagtctcaggtgtggcgttactccaccgggcttcatgac
ccggacagcgatctgcgctacgcggatccgcaggcggcgctgttctccttcaactcggcg
tacggcgcgtgcgagacgtgccgcggcttcggccgcgtgatcggcgtcgatctcggcctc
gtgattcccgacgcgcgcaagacgctgcgcggcggcgccgtcaagccgatgcagacgccc
gcgtggaaggagtgccaggacgacctgatgcgctatgcggcgaaagcgaacatccggcgc
gatacgccgtgggcggagctcacgcccgccgagcaggactgggtgatcaacggctcgtcg
gactggaacggcaaatggcagagccagtggtacggcgtgaagcgcttcttcggctatctc
gaatcgaaagcgtacaagatgcacatccgcgtgctgctgtcgaaataccgcagctacacg
ccgtgtgcggtgtgcggcggcgcgcgtctgaagacggaggcgctgctgtggcggctcggc
acgaaggcgaacgccgacgcggtgctcgcgagcgccgatcgcttcatgccgcgcggcgtc
gactggacccgcgcgcagctcgaggcgctgccgggcctgacggtgcacgacctgatgctg
ctgccgatcgagcggatccgccgcttcttcgacgacatcagcctgccgagcgcgctgctc
gacgatgcgctgaagctgctgctcgccgaggtgcgcacgcggctgaagtacctgtgcgac
gtggggctcggctacctgacgctcgaccggcagagccgcacgctgtcgggcggcgaggtg
cagcggatcaacctgacgacggcgctcggcacgtcgctcaccaagacgctgttcgtgctc
gacgagccgagcatcgggctgcatccgcgcgacctgaaccggatcgtcgaggcgatgcgg
cgcctgcgcgacgcgggcaatacgctcgtcgtcgtcgagcacgatccgtcggtgatgctc
gcggccgaccggctgatcgacatgggccccggcccgggcgagcgcggcggcacgatcgtc
tacgacggcacgcccggcgcgatccgctcggcccgcacgctgacgggcgagtatctcggc
ggccgcaagcacgtcgcgcacgcgtcgaactgggcgcgccggccggtggacgcgcgcacg
ccgcgcatcgtgctcgagggcgcgagcgagcacaatctgcgcgacgtcacggtcgagatt
ccgttgcagcgcctcgtatgcgtgacgggcgtgtcgggttccggcaaatcgacgctgttg
caggacgtgctctatccggcgatggcgcggcacttcggcaaggccaccgaatcgccgggc
gcgtaccgccgcctcgcgggcgcggagcaggtgggcgacgtcgtgttcgtcgaccagtcg
ccgatcggcaagaccacgcgctcgaacccggcgagctatgtcggcgcgttcgacgagatc
cgcaagctgttcgcgaaggcgccgcttgcgctgcagcgcggctacagcgcgggcaccttc
agcttcaactccggcgacggccgctgcccgagctgcggcggctccggcttcgagcacatc
gagatgcagttcctgagcgacgtctacctgcgttgcccggactgcgacggcagccgctac
cgggccgagatcctcgaagtgcggatcgagcgcggcgggcgcgcgctcagcgtcgccgac
gtgctcgatctgaccgtcagcgaggccgcggcgtgtttcgccgccgacgccgacgtgctg
cgcgtgctgcagccgatcgtcgacgtcggcctcgaatacgtgaagctcggccagccggtg
ccgacgctgtccggcggcgaggcgcaacgcctgaagctggcgggctttctcgcggaatcc
gcgaaggcgcgcgacgggcgccgcgtcgtcacggaagaggcgcgcgtcgcgcgggcgcgg
ctcttcatgttcgacgagcccaccaccgggctgcatttcgacgacatcgcgaagctgatg
caggcgttcggcaagctgctcgcgagcggccattcgctgatcgtgatcgagcacaatctc
gacgtgatccgcgcggccgactggctgatcgatctcggcccggaaggcggcgacggcggc
ggcctcgtgctgtgcgcgggcacgcccgacgacgtgaaggcctgcgccggctcgcatacg
ggcgcggcgctgctgcagtacgagcgcgcgatgaacgtcggggccgacgccgacgcatcc
ggcgacgcgggcgtgccgctgcaggccgcgctgaacgcggcgcgcgcgcgccgcgcgatc
gaaggcgagaacgtggtgcggatcgtcaatgcgcgcgagcacaacctgaaggcgctcgac
gtcgacattccgcacggcaagttcaacgtggtgaccggcgtgtccggctccggcaagtcg
acgctcgcgttcgacatcctcttccacgagggccagcgccgctacctcgaatcgctgaac
gcgtacgcgcgctcgatcgtgcagccggccgggcgccccgaagtcgacgcggtgtatggc
attccgccgacggtggcgatcgagcagcggctgtcgcgcggcggccgcaagagcacggtc
gcgacgacctccgaagtgtggcatttcctgcggctgctgtacgtgaagctcggccttcag
cattgcatccacgacggcacgccggtgacgtcgcaaaccgtcgaatcgatcgccgcgcag
ttgctgcgcgatcatcgcggcgagcacgtcgggctgctcgcgccgctcgtcgtcaatcgc
aagggcgtgtacacggatctcgcgaagtgggcgaaggcgcgcggcaacacgcacctgcgc
gtcgacggcgaattcgtgacggtggacccgtggccgaagctcgaccgcttccgcgagcac
acgatcgagctgccggtggccgacctcgtcgtgtcgccggacaacgaggccgagttgagg
cagcgcctggacgagacgctcgagctcggcaagggcgtgatgcatctgctcgcgccgctc
gacgggctgcgccatgcgatggacaaccgcctttgcaccgccggcgtcggcgcgatcaag
gtgctgtcggtcaagcgcgcatgcccggtgtgcggcacgagctacccggagctggacccg
cggatgttctcgtacaacagcaagcatggctggtgcacgacctgcgtgggcaccggcctc
gcgctcacgcgcgagcagcgcgcggcctacgacgacacggtgcttgccgaggacggccgc
ggccgcgagcagacgctgccttccgacgagcaggagccggagggcgtcggtgacgagccg
tgcccggattgcggcggcacgcggctgaacccgtccgcgcgcgcggtgactttcggccgc
cattcgatcgtcgacgtcgcgcaatggaccgtgacggatacgcgccgctggatcgagggc
ctgcagctcgccgggcgggacgcgcagatcgcgcgcgacatcgtcggcgaaatcggcagc
cgtctcgcgtttctcgaggaagtcgggctcggctatctgagcctcgatcgcgcggcgccg
agcctgtcgggcggcgaagcccagcgcatccggctcgcggcgcagctcggcagcaacctg
cagggcgtgtgctacgtgctcgacgagccgacgatcggcctgcatccgcgcgacaaccag
atcctgctgagcgcgctgcgcaagctcggcgacaagggcaacacgctcgtcgtcgagcac
gacgaagacacgattcgccgcgccgatcacatcatcgacatcggcccgggcgccggcagg
cgcggcggcacgctggtcgcgcagggcggggtcgcggacctgtccgcgcagtcggcctcg
gtgacggggcgcttgctcgcgcagccgatgacgcatccgctgcagccgcggcgcagcgtg
aatccgccgggcaagaggaacgggcacgcggtgccgcaagcgtggctgacggtgcatcgc
gcccggctgcacaacctgcgcgacgtcacggtcggcatgccgcttgcgcggctcgtcgcc
gtgacgggcgtgagcggctcgggcaagtcgacgctcgcgcgcgatgtgctgatgacgaac
ctgctcgacgcggtgggccgctcggtgctgtcgtcgccggccgcgcggcgcgcacgcaag
gccgcgcagcaggacgcgccgcgggcggcgaagagccgcgcgagcgtgctcgcgcgcagc
gccccgaggcccgtgctgaacgtcacgcatgcgtggcaaggctgcgagtcgatcagcggc
tgggagcatatcgaccgcgtgctcgaagtcgaccagacgccgatcggcaagacgccgcgc
tcgtgcccggcgacctacatcggcgtgtgggacgcgatccgcaggctgttcgcggacacg
ctggaggcgcgcgcgcgcggctacacggcgtcgcgtttctcgttcaacaccggcgaaggg
cgttgccccgcatgcgaagggcaaggcgtgcgcacgatcggcatgagcttcctgcccgac
gtgaaagtgccgtgcgacgtgtgccacgggcagcgtttcaacccggagacgctcgcggtg
acgtggcgcggccggaacatcggcgacgtgctgacgatggagatcgacgaagcggtggag
tttttcgcgccgttgtcgaacatcgcgcatccgctgcaactgatgaaggacgtcggcctc
ggttatctgacgctcggccagccgtcgccgacgctgtccggcggcgaggcgcagcgcatc
aagctcgtcaccgagctgagcaaggtgcgcgacgatgtcacgcggcgcggccagaaagcg
ccgcacacgctgtacgtgctcgacgagccgaccgtgggcctgcacatggccgacgtcgcg
aagctgattcgcgtgctgcaccggctcgtcgacgcggggcacagtgtcgtcgtgatcgag
cacgacctcgatgtgatcgcggaggcggactggatcgtcgatctcggcccggagggcggt
gcgggcggcggcacgatcgtggcggccgcgcctccggaagggctcgtggaggtgagcgca
agccatacggggcgcgcgctcggagccgtgctggcgcgaacgggcgcggaccgggacgaa
ccgctgcgaagcgggacggcgcgcgccggttga
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