Bermanella marisrubri: HF888_00275
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Entry
HF888_00275 CDS
T06527
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmar03016
]
HF888_00275 (mnmE)
Transfer RNA biogenesis [BR:
bmar03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HF888_00275 (mnmE)
Prokaryotic type
Methyltransferases
HF888_00275 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
GTP_EFTU
ABC_tran
Ras
ABC_ATPase
cobW
AAA_28
Roc
Gtr1_RagA
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QIZ82770
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Position
complement(60270..61637)
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AA seq
455 aa
AA seq
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MQLNTDTIAAIATPPGRGGVGIVRVSGKKAKAIAQQILGFEPKVRFAHYCPFKDENDEVL
DEGLALFFEGPNSFTGEDVLELQGHGGPVILDFLLQRVLALGARAARPGEFSERAFLNDK
MDLTQAEAIADLIDSASEQAARCAVRSLQGAFSQRVKELVDALINLRIYVEAAIDFPEEE
IDFLSDGKVEADLHQVMDALKQVQQEANQGSILREGMTVVIAGRPNAGKSSLLNALAGRD
TAIVTHIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAPDEVERIGIERAWQEIEQADRVL
LMVDSTETDATDPKSIWPEFVDKLPHPERITVIRNKVDLTNEKAGMDEATQNSPIVRLAA
KQGDGVTELREHLKTIMGYSATSEGGFIARRRHIEALNQADTFLQSGRDQLLGAAAGELL
AEDLRMAQNALNEITGEFSSDDLLGKIFGSFCIGK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaaataccgataccatcgctgccattgcaacgccacctggacgaggtggtgtg
ggaattgttcgtgtatcgggcaaaaaagccaaagccatcgctcagcagattttagggttt
gaacccaaagtgcgctttgcacactactgcccgttcaaagatgaaaatgatgaagtattg
gatgaaggcttagccttatttttcgaaggtccaaattcttttacgggtgaagacgtttta
gagctacaaggccatggcggccctgtgattttagatttcttattgcagcgtgttttagcc
ttgggcgctcgtgccgctcgaccaggtgagttttctgagcgcgcctttttaaacgataaa
atggatttaacccaagcggaagccattgccgatttgattgattccgcttcagagcaagcg
gcgcgctgcgctgtacgatccttgcaaggtgctttcagtcaaagagtcaaagaacttgtc
gatgcgctcatcaatttacgcatctacgtagaagcggccattgatttccccgaagaagaa
atcgatttcttaagtgatggcaaagtcgaagcggatttacatcaagtcatggatgcactc
aagcaggtacagcaagaggccaatcaaggttccattttgcgtgagggcatgactgtggtg
attgcgggtcgccccaatgcgggtaaatccagcttattaaatgctttggctggacgtgat
accgccattgttacccacattgcaggaaccactcgtgatgtattgcgagaacatatccac
attgatggcatgccgctgcatattatcgatactgcaggtctgcgtgatgcccctgacgaa
gtggaacgcattggtatcgaacgcgcttggcaagaaatagagcaagcggatcgtgtgtta
ttaatggtcgatagcaccgaaaccgatgcaaccgaccctaaatccatatggcccgaattt
gtggataaattaccgcatcctgaacgcatcactgtgattcgcaacaaggtcgacctgact
aatgaaaaagcgggcatggatgaagcgactcagaactcccctatcgttcgcttagcggct
aagcaaggtgatggcgtaacagaactgcgcgaacacctgaaaaccatcatgggttatagc
gccaccagtgaaggcggattcattgcccgtcgtcgccacattgaagcgttgaatcaagca
gatacgttcttgcaaagcgggcgagatcaattattaggagccgcagccggagagctttta
gcggaagatttgcggatggcgcaaaatgcattgaatgaaatcactggtgagttcagcagt
gatgatcttctgggcaaaatctttggtagtttctgtattggtaagtaa
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