Bermanella marisrubri: HF888_00625
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Entry
HF888_00625 CDS
T06527
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF888_00625 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmar03400
]
HF888_00625 (mutM)
Enzymes [BR:
bmar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HF888_00625 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HF888_00625 (mutM)
DNA repair and recombination proteins [BR:
bmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HF888_00625 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5817
AGAO-like_N2
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIZ82829
LinkDB
All DBs
Position
complement(136707..137543)
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETTRAGIEPHIIGHQIKAFHVRQPQLRWPIPTELATLLTGNRVQAVRRRAKYL
LIDIAAGKSEDLLGTLIIHLGMSGSLRVINAKPYPDPKKHEHFDIEFDDCLVRFNDPRRF
GACLWQAADEVDSRLQHLGPEPLSDTFNGDYIFAKSRGRSSAIKTFIMDQRIVVGVGNIY
ASESLFLAGINPKKAAGKVSKKKYQELVSAIKIVLDNAIAQGGTTLRDFTSSDGKAGYFA
QELRVYGREGLGCIQCQQPIKQIVQGQRSTFYCTKCQR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagtcgaaacgacccgcgccggaatcgagccgcatattattggc
catcagatcaaagccttccacgtgcgtcagccacaattgcgttggccgatccctactgag
ctggccactttattaaccggcaatcgcgtgcaagcggtgcgccgtcgcgccaagtattta
ttaattgatattgcggcgggcaaaagcgaggatctgctcggcactttgattatccatctt
ggcatgtctggctcgctgcgtgtgattaatgccaaaccttatccagaccccaaaaaacac
gagcactttgatattgagtttgatgactgcctagtgcgttttaatgatccaagacgcttt
ggcgcgtgcctttggcaagcagccgacgaagtagacagccgcttacaacacctggggcca
gaaccgttaagtgataccttcaatggcgattacattttcgccaaaagtcgcggccgtagc
agcgccatcaaaaccttcatcatggatcagcgaattgtcgtaggcgttggtaatatttat
gccagtgaatcgctgttcttggctggcatcaatcccaaaaaagccgctggtaaagtgagc
aagaaaaaataccaagaactcgtcagcgccattaaaattgttttagataacgccatcgcg
caaggcggtacaacactgagagattttactagcagtgatggcaaagcgggttactttgct
caagaattgcgcgtgtatggccgagaaggcctaggctgtattcaatgtcagcaacctata
aagcagattgtgcagggccaacgcagtactttttattgcacaaagtgccaacgctga
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