Bermanella marisrubri: HF888_00650
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Entry
HF888_00650 CDS
T06527
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00300
Lysine biosynthesis
bmar00470
D-Amino acid metabolism
bmar01100
Metabolic pathways
bmar01110
Biosynthesis of secondary metabolites
bmar01120
Microbial metabolism in diverse environments
bmar01230
Biosynthesis of amino acids
Module
bmar_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HF888_00650 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HF888_00650 (lysA)
Enzymes [BR:
bmar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HF888_00650 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QIZ82833
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Position
141559..142812
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AA seq
417 aa
AA seq
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MTDVFDYQNGELFAEQCAVSDLADRYGSPLYIYSRKAFSEHYLEYANAFKNEDALICYAV
KANSNIAVLNVLAKLGAGFDIVSVGELERVLKAGGDPSKIVFSGVAKTADEMRRALAVGV
HCFNVESESELERLNAVAEEMGVKAPLSLRVNPDVDAQTHPYISTGLKENKFGVDIDTAK
QVYAKAKGMQGIEIKGVDCHIGSQLTQLEPFMDALDRVLVLVDELKEQAIELEHIDLGGG
LGVTYDDEVPPTPQEFADAVLPKLAGRNLKLVLEPGRSIAANAGIFVTQVEFLKSNGDKH
FAIIDGGMNDLIRPSLYSAWQRIVEVQPREKTPKQNYDVVGPVCETGDFLGKDRELAILP
GDLLAVKSAGAYGFVMASNYNTRNKPAEVMVDGDQSHLIRRRETISDQLMLEALIQD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtattcgattatcagaatggcgagttatttgccgagcaatgtgccgtaagc
gacttggccgatcgttatggttcgcctttatatatttattcacgtaaggcatttagtgaa
cattacttggaatatgccaatgcatttaaaaatgaagatgcacttatttgctacgcagta
aaagcgaatagcaatatcgcagtgctgaatgtactggcaaaattgggtgcgggattcgat
attgtatcagtcggtgaacttgagcgtgttcttaaagccggtggagatccaagtaaaatt
gttttttctggtgtcgcaaaaaccgctgatgaaatgcgtcgtgctttggcagtaggtgtg
cattgttttaacgtagaaagcgaatcagaactagaacgtcttaatgcggtagccgaagag
atgggcgtcaaagcgcccctgtcattgcgtgttaaccctgatgtggatgcgcaaactcac
ccgtatatttccacaggattaaaagaaaataaatttggtgtggatatcgataccgctaag
caggtttatgccaaagccaaaggcatgcagggtatcgagattaagggagtagattgccat
attggttctcaattgactcaacttgagccgtttatggacgcacttgatcgcgttttggtg
ttagtggacgagctaaaagaacaagctatcgaactagagcatattgacttaggtggtggt
ttaggcgtgacttatgacgacgaagtaccgccgacaccgcaagaatttgcagatgccgtg
ttgccaaaactagcgggtcgcaacttaaaattggtattggagcctgggcgatccattgca
gctaatgcaggtattttcgtcactcaagtggagtttctaaagagtaatggtgataaacat
tttgccattatcgacggcggtatgaacgatttaattcgtccttccctgtacagtgcttgg
cagcgtattgtggaagttcaaccccgtgaaaaaacccctaagcaaaactatgatgtggtg
ggacctgtttgtgaaacgggcgactttttagggaaagatcgtgaactagcgattttacct
ggcgatttattagcagttaaaagtgccggcgcgtatggctttgtcatggcgtccaactac
aatactcgcaataaaccagcggaggttatggtggatggtgatcaatctcacttgattcgc
cgtcgcgaaacgatttcggatcagttaatgttagaagcattaattcaagactag
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