KEGG   Bermanella marisrubri: HF888_00650
Entry
HF888_00650       CDS       T06527                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
bmar  Bermanella marisrubri
Pathway
bmar00300  Lysine biosynthesis
bmar00470  D-Amino acid metabolism
bmar01100  Metabolic pathways
bmar01110  Biosynthesis of secondary metabolites
bmar01120  Microbial metabolism in diverse environments
bmar01230  Biosynthesis of amino acids
Module
bmar_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bmar00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    HF888_00650 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HF888_00650 (lysA)
Enzymes [BR:bmar01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     HF888_00650 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF1955
Other DBs
NCBI-ProteinID: QIZ82833
LinkDB
Position
141559..142812
AA seq 417 aa
MTDVFDYQNGELFAEQCAVSDLADRYGSPLYIYSRKAFSEHYLEYANAFKNEDALICYAV
KANSNIAVLNVLAKLGAGFDIVSVGELERVLKAGGDPSKIVFSGVAKTADEMRRALAVGV
HCFNVESESELERLNAVAEEMGVKAPLSLRVNPDVDAQTHPYISTGLKENKFGVDIDTAK
QVYAKAKGMQGIEIKGVDCHIGSQLTQLEPFMDALDRVLVLVDELKEQAIELEHIDLGGG
LGVTYDDEVPPTPQEFADAVLPKLAGRNLKLVLEPGRSIAANAGIFVTQVEFLKSNGDKH
FAIIDGGMNDLIRPSLYSAWQRIVEVQPREKTPKQNYDVVGPVCETGDFLGKDRELAILP
GDLLAVKSAGAYGFVMASNYNTRNKPAEVMVDGDQSHLIRRRETISDQLMLEALIQD
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgaccgatgtattcgattatcagaatggcgagttatttgccgagcaatgtgccgtaagc
gacttggccgatcgttatggttcgcctttatatatttattcacgtaaggcatttagtgaa
cattacttggaatatgccaatgcatttaaaaatgaagatgcacttatttgctacgcagta
aaagcgaatagcaatatcgcagtgctgaatgtactggcaaaattgggtgcgggattcgat
attgtatcagtcggtgaacttgagcgtgttcttaaagccggtggagatccaagtaaaatt
gttttttctggtgtcgcaaaaaccgctgatgaaatgcgtcgtgctttggcagtaggtgtg
cattgttttaacgtagaaagcgaatcagaactagaacgtcttaatgcggtagccgaagag
atgggcgtcaaagcgcccctgtcattgcgtgttaaccctgatgtggatgcgcaaactcac
ccgtatatttccacaggattaaaagaaaataaatttggtgtggatatcgataccgctaag
caggtttatgccaaagccaaaggcatgcagggtatcgagattaagggagtagattgccat
attggttctcaattgactcaacttgagccgtttatggacgcacttgatcgcgttttggtg
ttagtggacgagctaaaagaacaagctatcgaactagagcatattgacttaggtggtggt
ttaggcgtgacttatgacgacgaagtaccgccgacaccgcaagaatttgcagatgccgtg
ttgccaaaactagcgggtcgcaacttaaaattggtattggagcctgggcgatccattgca
gctaatgcaggtattttcgtcactcaagtggagtttctaaagagtaatggtgataaacat
tttgccattatcgacggcggtatgaacgatttaattcgtccttccctgtacagtgcttgg
cagcgtattgtggaagttcaaccccgtgaaaaaacccctaagcaaaactatgatgtggtg
ggacctgtttgtgaaacgggcgactttttagggaaagatcgtgaactagcgattttacct
ggcgatttattagcagttaaaagtgccggcgcgtatggctttgtcatggcgtccaactac
aatactcgcaataaaccagcggaggttatggtggatggtgatcaatctcacttgattcgc
cgtcgcgaaacgatttcggatcagttaatgttagaagcattaattcaagactag

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