Bermanella marisrubri: HF888_00865
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Entry
HF888_00865 CDS
T06527
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmar03021
]
HF888_00865 (rpoH)
Transcription machinery [BR:
bmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HF888_00865 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
KORA
HTH_10
IF2_N
UCR_14kD
2Fe-2S_thioredx
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QIZ82868
LinkDB
All DBs
Position
complement(181029..181895)
Genome browser
AA seq
288 aa
AA seq
DB search
MSTSLMAQNIASLSPGRDLDGYLNAIGGIAVLSAEEERELADRLYYESDLEAARRLVLSH
LRFVVHIAKSYNGYGLNQSDLIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFI
LKNWRIVKVATTKAQRKLFFNLRSAKKRNGWLNEAEAHKIAEDLGVSAKEVYEMEGRLSS
HDSTFDSPVADDEDSAYQAPANYLEDHSFDPALAVENENYEQDSTARLQDALVQLDDRSK
DILMRRWLGEHKATLHELADEYGVSAERIRQLEKNAMKKIKGMIEASH
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcttaatggcccaaaacatcgcaagcctgtcacccggtcgtgacctcgat
ggctacctaaatgcgatcggcggcattgctgtgttgagcgccgaagaagagcgagaactg
gctgatcgcctttattacgaaagcgacctagaagctgcgcgccgtcttgttctatctcat
ctgcgctttgtagttcacattgccaagagctacaacggttatggcttgaaccaatctgac
ctcattcaagaaggtaacgttggcctcatgaaagcggtaaaacgcttcaaccctgaggta
ggcgttcgtctagtgagctttgctgttcactggatcaaagcagagattcacgaatttatc
ctcaagaactggcgcattgtgaaagtggccaccacaaaggctcagcgcaaattgttcttc
aatctgcgtagcgcgaaaaagcggaatggctggttgaacgaagctgaagcacacaaaatc
gctgaagatctaggtgtgagtgctaaagaagtatacgaaatggaaggtcgtttgagctcc
catgacagtacattcgatagcccagttgctgatgatgaagatagcgcttatcaggcgcca
gctaactatctagaagaccatagctttgacccagccctcgcggtggagaatgaaaactat
gagcaagacagtacagcacgcctacaagacgcgttagtgcagctagatgatcgcagtaaa
gacatcttgatgcgtcgttggttaggagagcataaagccacgcttcatgaactagctgac
gaatatggtgtatctgctgagcgtattcgccagcttgagaaaaacgccatgaagaaaatc
aaaggcatgattgaagcttcccactga
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