KEGG   Bermanella marisrubri: HF888_01480
Entry
HF888_01480       CDS       T06527                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bmar  Bermanella marisrubri
Pathway
bmar03030  DNA replication
bmar03430  Mismatch repair
bmar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bmar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HF888_01480
   03430 Mismatch repair
    HF888_01480
   03440 Homologous recombination
    HF888_01480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bmar03032]
    HF888_01480
   03400 DNA repair and recombination proteins [BR:bmar03400]
    HF888_01480
Enzymes [BR:bmar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HF888_01480
DNA replication proteins [BR:bmar03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HF888_01480
DNA repair and recombination proteins [BR:bmar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HF888_01480
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: QIZ82982
LinkDB
Position
complement(329526..330242)
AA seq 238 aa
MLFKKPKFDWPQRYQTLQLEAEHPAVKDFYYKGIVSGETPLEAVSFMALDFETTGLNPND
DSIISIGMVPFSLQRIYCNNAVYWVVRPNTPLSEESILIHHIKHSEIQSAPRIERLLEPL
LEKLSEHILVVHFQRIERLFLNNTLKEHLGETLQFPLIDTMEIEKKALKARQGLTGRILN
KPVGGIRLNNCRERYSLPQYQSHNALIDAQATAELFIAQVAHHFTPQTPVKNLWLDDI
NT seq 717 nt   +upstreamnt  +downstreamnt
atgttatttaagaagccgaagtttgattggccacagcgttatcaaacattgcaattagag
gctgaacacccagctgtaaaagacttctactacaaaggtattgtttcaggagaaacgcct
ttagaggcggtttcttttatggccttggattttgagacaaccggcctcaatcccaatgac
gatagtataattagcataggcatggtgccatttagcttgcaacgaatatattgtaacaat
gcagtgtattgggtagtcagaccgaatactccgctatcagaggagtcaatactaattcat
cacattaaacacagtgagatacaaagcgcaccgagaattgagcgattattagagccattg
cttgagaaactcagtgagcacatcctagtggttcacttccaacgtatcgaaagactgttt
ttaaataatacgctcaaagaacatttaggagagactttacaatttcctctcattgataca
atggaaatagaaaagaaggcactgaaagcaagacaaggcctaaccggaagaattttaaat
aaacccgtaggcggcatccgtttgaataattgtcgtgagcgttattcgctacctcaatat
cagtctcataatgcattaattgatgcgcaagccacagcagaattatttattgctcaggtt
gctcatcatttcactccgcaaacaccagtcaaaaatctatggctagacgatatctaa

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