Bermanella marisrubri: HF888_01740
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Entry
HF888_01740 CDS
T06527
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HF888_01740 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmar03021
]
HF888_01740 (rpoA)
03400 DNA repair and recombination proteins [BR:
bmar03400
]
HF888_01740 (rpoA)
Enzymes [BR:
bmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HF888_01740 (rpoA)
Transcription machinery [BR:
bmar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HF888_01740 (rpoA)
DNA repair and recombination proteins [BR:
bmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HF888_01740 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Rad9_Rad53_bind
Motif
Other DBs
NCBI-ProteinID:
QIZ83033
LinkDB
All DBs
Position
377079..378080
Genome browser
AA seq
333 aa
AA seq
DB search
MQRSVNEFLTPRHIQVEQVSNTQAKVTLEPLERGFGHTLGAALRRILLSSMPGAAIVEVE
IDGVLHEYSTIEGVQEDVIEILLNLKGVAVRLHERDEAFLTLHKTGAGQVTAADIQLDHG
VEIANPEHVIANLSDKGELKMTIKVAAGRGYETVESRNQNEEETKAIGKLQLDATYSPVK
RVAYGVENARVEQRTDLDKLVIDLETNGTIEPEEAIRRSATILQQQLAVFVDLENEAEPE
PEEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMHLENWPPASLKKDDKALA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgaacgaatttctaactccgcgtcacattcaagtagagcaggttagc
aatacacaggctaaagtcactctggaaccgctagagcgtggtttcggccacactttaggt
gctgcgttgcgtcgtatccttctctcttctatgcctggcgcagccattgtggaagtggaa
attgacggtgtacttcacgagtacagcactattgaaggtgtacaggaagacgtaatcgaa
atcctgctaaaccttaagggtgttgccgtgcgcttgcacgagcgtgacgaagccttcttg
acccttcacaagactggcgctggccaggtgacagctgctgacattcagcttgaccatggg
gtagaaattgctaacccagaacacgttatcgctaacctaagcgataaaggtgagctgaaa
atgaccattaaggtcgcagcaggtcgcggttatgagacggttgagtctcgtaatcaaaac
gaagaagagactaaggcaattggtaaattgcagttggatgcgacatacagcccagttaag
cgtgtagcttacggtgttgaaaatgcccgtgtcgaacagcgtactgacctagacaaattg
gttatcgatctggaaaccaatggcaccattgagccagaagaagcgatccgtcgctctgca
acgatcctacagcagcagttagctgtattcgttgatctggaaaatgaagccgagccagag
ccagaagagcaagaagatgaaatcgatcctatcttgttgcgtccggtagatgaccttgag
ttgactgtacgctctgcaaactgcttgaaagcagaaaatatttactacatcggtgacctg
attcagcgcaccgaagttgagttgctgaaaacccctaacttgggtaagaaatcgctaacc
gaaattaaagacgtgttagcttctcgtggattgtcattgggtatgcaccttgagaactgg
ccaccagctagtttgaaaaaagatgacaaggcacttgcctaa
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