Bermanella marisrubri: HF888_03235
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Entry
HF888_03235 CDS
T06527
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
bmar
Bermanella marisrubri
Pathway
bmar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HF888_03235 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmar03400
]
HF888_03235 (mutS)
DNA repair and recombination proteins [BR:
bmar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HF888_03235 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QIZ85735
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Position
complement(714034..716664)
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AA seq
876 aa
AA seq
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MMQQYLRIKAEHPQQLVFYRMGDFYELFYDDAKKSARLLDITLTARGKSGGAPIPMAGIP
YHAAEGYIAKLVKMGESVAIAEQIGDPATSKGPVERKVVRVITPGTLTDESFLDERRDNL
LVAVNSHIDGRTQKQTHGIATLDISSGRFSVMEVHSEEALHGELERLRPAELLYSEDQQH
SNEIVERKGAQSLPPWEFEYETGFRLLTEQFQTKDLHGFGCQHLKQAIGAAGSLIHYAKE
TQRTNLPHIRTLLLEQADDAIVMDAATRKNLEIDINLNGDTDFTLAWVLDRTATAMGSRL
LRRWLNRPLRQQSVLKERQHAIGAMIETHGYEDIHNVLKQIGDIERILSRVALRSARPRD
LARLRDALAVLPQLQNAISDVDAAPIAALGQRISTYPETVETLTNAVVENPPVVIRDGGV
IAEGFDEELDELRGISENAGQFLIDIETREREKTGISTLKVGYNRVHGYYIEISKAQAGE
APTEYIRRQTLKNAERFITPELKEFEDKALSSKSRALSREKALYEELIESLADQLAALQD
TAAAISELDVLSNLAERAVTQRYVRPELTENAGIDIQQGRHPVVEAVIEDPFVANDVRFD
QNRKMLVITGPNMGGKSTYMRQAAHIALLAHIGSYVPADSATIGLLDRIFTRMGSSDDVA
GGRSTFMVEMTETANILHHATAQSLVLMDEVGRGTSTFDGLSLAWASAEYLSKHTQAYTL
FATHYFEMTQLVESSDNVANVHLTATEHNDHIVFLHHVEEGPASQSYGLQVAKLAGVPLE
VVEQAKQKLALLEETNIEPSPIEQSISETPQVAKVTEPQPSASQPNDSAEAIWQGDMFAA
PPEPSEVELALKDISPDDLTPRQALELLYELKGKLK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcaatatttgcgcattaaagcggagcacccgcagcagctggtgttttatcgc
atgggtgatttctatgagctgttttatgacgatgccaagaaaagcgcgcgcttattggac
attacgctaaccgcgagaggcaaaagcggtggcgcgccgatccccatggcaggtatccct
taccatgcagcggaaggctatatcgccaaactggtgaaaatgggtgaatctgtggccatt
gccgagcaaattggcgacccagccaccagcaaggggccagttgaacgcaaagtcgtgagg
gtgattacaccgggtaccctgacagatgaaagctttttggatgagcgtcgagacaattta
ttggtagcggtgaatagccacattgatggccgaacacaaaaacagacccatggcattgca
acactggatatcagcagcggccgcttcagtgtgatggaagttcattcagaagaagcattg
catggtgaactagagcgtctgcgcccggctgagctgctctacagtgaagatcaacaacac
agtaacgaaatagtcgagcgtaaaggggctcagagtttgccgccttgggaatttgaatac
gagactggctttcgcctgctgaccgaacaattccaaaccaaagacttgcatggctttggt
tgtcagcatttgaagcaagccattggcgctgcaggtagtttgattcattacgctaaagaa
actcagcgcaccaacttgccccacattcgcactctccttctagagcaagcggacgatgcc
atcgtcatggatgcggctacccgcaaaaatctcgaaattgatatcaatttaaacggtgat
actgatttcaccttggcctgggtattagatcgtaccgcgacggccatgggcagtcgacta
ttgcgtcgctggctgaatcgacccttacgtcaacaatccgtgttgaaagagcgacaacat
gctattggcgccatgatcgaaacccatggttatgaagatatccacaatgtgctcaaacaa
atcggtgatatcgagcggattctcagccgagtggcattgcgcagcgcccgccctcgagat
ctggcgcgcttacgagatgctttagccgttttaccacaattgcaaaacgccatatcagat
gtcgatgcagcgcccattgcggctctgggtcaacgcattagtacctacccagagacagtt
gaaaccctaaccaatgcggttgtagaaaacccacctgtggtgattcgtgacggtggtgtg
attgccgaggggtttgacgaagaattagatgagctgcgcggcatcagtgagaacgccggc
cagttcctaatcgacattgaaacccgtgaacgtgaaaagaccggtattagcaccttaaaa
gtaggctacaaccgagtgcacggttattacattgaaatcagcaaagctcaagcgggtgag
gcgccaaccgagtatattcgtcgacagacattgaaaaatgcggagcgttttatcacacct
gaacttaaagagtttgaagacaaagcgctttccagcaaaagccgcgcgctttctcgagaa
aaagccctttatgaagaactcattgaatccttagcggatcaattagcggctctgcaagat
acagcggccgccatcagcgaactggatgtattgtcgaatttagcagaacgagccgtcacc
cagcgctatgttcgccctgagctcaccgaaaatgctggcattgatattcaacagggccgc
caccccgtggtagaagccgtcatcgaagacccatttgtggcaaacgatgtgcgctttgat
caaaaccgtaaaatgctcgtgattaccggcccaaacatgggtggtaagtcgacctatatg
cgtcaagcagcacacattgcgttgctcgcccacattggtagttatgttccggcagatagc
gcgacgattggtcttctagatcgcatttttacccgtatgggctcaagcgatgacgtcgcc
ggtggccgttcaacctttatggtagaaatgacagaaaccgctaacattctccatcacgct
actgcgcaaagcttggtcttgatggatgaagtgggtcgcggtaccagtacgtttgatggt
ttatctttagcttgggccagcgctgaatatctctcaaaacacactcaagcctatacccta
ttcgcgacccactattttgaaatgacgcagttggtggagagcagtgacaatgttgccaac
gtgcatttaaccgctaccgaacataatgaccatattgtatttctccaccatgtggaagaa
ggccccgccagccaaagctatggcttgcaagtagccaagctagcgggcgtgcctttagaa
gtcgtggaacaggccaaacaaaagcttgctttgttagaagaaaccaacattgaacccagc
ccgattgagcaatccatttctgagacacctcaagtggctaaagtcacggaacctcaacct
tcagcgtctcagccaaacgacagtgcagaagccatctggcagggagacatgttcgcagca
ccgcctgaacccagtgaagtggaattagcgcttaaagatatcagcccagatgatctgaca
ccaaggcaagcgcttgaactactttatgaactcaagggcaaactaaaataa
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