Bermanella marisrubri: HF888_04160
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Entry
HF888_04160 CDS
T06527
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
bmar
Bermanella marisrubri
Pathway
bmar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF888_04160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
bmar02022
]
HF888_04160
02035 Bacterial motility proteins [BR:
bmar02035
]
HF888_04160
Two-component system [BR:
bmar02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HF888_04160
Bacterial motility proteins [BR:
bmar02035
]
Pilus system
Twitching motility proteins
HF888_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
HTH_30
AAA
HTH_50
VpsR
AAA_22
cREC_REC
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
QIZ83463
LinkDB
All DBs
Position
complement(911634..913028)
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AA seq
464 aa
AA seq
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MQRILLLDDEPDILNLFLLTVKRMGLEATTAKTIADAKEALANQSFALCLTDMRLPDGSG
MDLIKYMQKHHRRTPVVMITAYGTMDVAIDAMKLGAFDFLSKPVELDKLRSIIENAIILS
EDAESELTDPTPASTGIIGDSPAIKRLHKQIGKVGRSHAPVFIYGESGTGKELVARAIHS
LGPRREKPFITVNCGAIPSELMESEFFGHVRGAFTGANTAKEGFFQAANGGTLFLDEVAD
LPLAMQVKLLRAIQENVVRPVGSETEHKVDVRILSASHKDLQALVTDNQFREDLFYRLDV
IRLEVPPLRERSEDIPAIAKHILKRQLEELGLASMTLGSEALSALQQHTFPGNVRELENL
LQRAITLSENQTITAEDLALTATNKKVIDSGEAQPSMAQNTPNTVANSHSLPAGMTLEDY
LEDIETQLIQQALEDCRWNKTAAAEQLGMSFRSLRYRLKKLNID
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcattctgttactcgatgatgagccggacatccttaacctattcctattgacg
gtaaagcgaatgggactcgaggcaacgaccgcaaaaaccattgccgatgctaaggaagcc
ttagccaaccaaagctttgccctatgccttactgacatgcgtttgccggatggctcagga
atggacttgataaagtacatgcaaaagcatcatcgccgcacccctgtggtcatgattacg
gcctatggcaccatggacgtcgccatcgatgccatgaaattaggcgcgttcgactttctg
tccaaaccggtggaactggataaactcagatccatcatcgaaaacgccatcattctcagc
gaagacgctgaatccgaactaacagaccccactccggcctccactggcattattggggat
agcccggccatcaagcgactccacaagcaaattggcaaagtcggtcgcagccatgcgcca
gtatttatttacggagagtcaggcacgggtaaggagctagttgcaagggccattcacagc
ctaggacccagacgggaaaagccctttatcacggtcaactgtggcgcaatccctagcgaa
ctcatggagagtgagtttttcggtcatgtgcgaggtgcgtttaccggagccaataccgcc
aaagaaggcttttttcaagctgcaaacggcggtacgttatttttagatgaagtcgcagat
ttgcccctagccatgcaggtcaaactattgcgcgccattcaagaaaacgtcgttcgtccc
gttggcagcgaaaccgagcataaagtcgatgtgcgtattttgtccgccagccataaagat
ttgcaggcactggtgaccgataatcagttccgcgaagatctgttttatcgcctcgatgta
attcgacttgaagtcccgcctctacgtgaacgcagtgaagatatccccgccattgccaaa
cacatactaaaaagacagcttgaggagttaggattggcgtccatgacactaggaagtgaa
gcgctgagcgctctgcagcaacataccttccctggaaatgtgcgcgaattagaaaattta
ctacagcgagcgattacattatcggaaaaccagactattactgctgaggatttagcctta
accgccacaaacaaaaaggtaatcgactctggagaagcgcagccctccatggcgcaaaac
acaccgaatacggtcgctaatagccatagcctacctgccggcatgactctagaagattat
ttagaggacatagaaacccagctgattcagcaggccctcgaagactgtcgctggaataaa
accgcggcagcggaacaactaggaatgagctttcgatccctacgatatcgccttaaaaag
ctaaacattgactaa
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