Bermanella marisrubri: HF888_04445
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Entry
HF888_04445 CDS
T06527
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmar03016
]
HF888_04445
Enzymes [BR:
bmar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HF888_04445
Transfer RNA biogenesis [BR:
bmar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HF888_04445
Prokaryotic type
HF888_04445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QIZ83518
LinkDB
All DBs
Position
969936..970982
Genome browser
AA seq
348 aa
AA seq
DB search
MDYAKIANQWPLAYSPLDITAQYRVEAEDFQVTELSNRILKEEGPHWYLFIEKTDTNTQW
LARQIANHAQIDLRDVGYAGLKDRHAITRQWFSIPVEKRQPDLTALFEREEFTLIDQGYY
GVKLKRGNLGGNHFKLRLRNVQGSKAELEQRLTMIKDQGVPNYFGGQRFGHDYDNIVQAE
RLFVSGKRPRNRQKASLFTSAARSFLFNEMLAHRVQGNVWQRPIKGDVFGFSGSLRGFIA
DGTAAESQRWRNQNIHPTCAMWGRGNSLSEADLADIEGQIAQKYEVLSQGLEKQGLKQER
RTTRMLLPDLAWTWQDDETLVLEFSLGSGYFATSLLRELGQIDDASKV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggactacgcaaaaattgctaatcagtggccactggcctattccccccttgatataacg
gcgcaatatcgagtggaagcagaagactttcaggtcactgaactaagtaatcgtatttta
aaagaagaaggacctcactggtatctattcattgaaaagaccgatacgaatactcaatgg
ttggctcgccaaattgccaatcacgcacaaattgatttaagagatgtgggctatgctggc
cttaaagatcgccatgctattacccgccagtggttcagtattccagtagaaaagcgtcaa
ccggatttaaccgcattatttgagcgcgaagagtttacattaattgatcaggggtattac
ggcgttaagcttaaacgtggcaacctcggcggcaatcatttcaagttacgcttgcgaaat
gtgcaaggaagtaaagctgaactagagcagcgattaaccatgattaaagatcaaggtgtt
cctaattattttggtggtcagcgctttggccatgattacgataacattgttcaagctgag
cgattatttgtgtctggcaagcgtccccgtaatcgtcaaaaagcatcactgtttacatca
gcagcccgttcatttttatttaatgaaatgctagctcatcgtgttcaaggtaacgtgtgg
caaagacctataaaaggcgatgtttttggatttagtggaagtcttcgcggttttattgca
gatggtaccgcagcggaatcgcagcgttggcgaaatcaaaatattcaccccacttgtgcg
atgtggggacggggaaacagtttaagcgaagccgatctcgccgatatagaaggccaaata
gcgcaaaaatatgaggtgttatcgcaaggactagagaaacaaggcttaaagcaagaacgt
cgcacaacacgtatgctgttgcctgatctggcttggacttggcaagatgatgaaacactt
gtcttggagttctcattagggtccggttattttgctacctctttgttaagagagctaggt
caaatcgatgatgcgagtaaggtataa
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