Bermanella marisrubri: HF888_04545
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Entry
HF888_04545 CDS
T06527
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HF888_04545 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bmar01007
]
HF888_04545 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmar03016
]
HF888_04545 (lysS)
Enzymes [BR:
bmar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HF888_04545 (lysS)
Amino acid related enzymes [BR:
bmar01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HF888_04545 (lysS)
Transfer RNA biogenesis [BR:
bmar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HF888_04545 (lysS)
Prokaryotic type
Other AARSs
HF888_04545 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QIZ83533
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All DBs
Position
986525..988066
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AA seq
513 aa
AA seq
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MADQQQDENKLIAERREKLSALRDGCKANGHRNDFDRKDLAADLQAKFGEFSKEELEAQD
NQVAVAGRIMFQRGPFTKINDASGGIQFYVPKDVQKEINYKSKFDLGDIVGARGALHKSG
KGELYVNVATADDLIMLTKSLRPLPDKFHGLADQEIKYRQRYVDLIINQETRDLFMVRSK
IIEAMRKYLSDRNFMEVETPMLQAIPGGATAKPFETHHNALGIDMYLRIAPELYLKRLLV
GGFERVFEINRNFRNEGLSTRHNPEFTMIEFYQAYATYHDLMDTTEDMLRNIAQDVLGTT
DIVSTEKDAEGNVVNETVYDFAKPFARLTMMEAVLKYNPDFDEAVINDPENNLDKLIAYG
RQVGIREDAKQSAWGAGKWLCEIFEETAEHKLDQPTFITAYPWEVSPLARRNDENPFITD
RFEFFVGGRELANGFSELNDAEDQAERFRKQVEEKDAGDDEAMHYDADYVQALEYGMPPA
AGEGIGIDRLVMLFTDSPTIKDVILFPHMRPRG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaacaggacgaaaacaaactgattgcggagcgccgcgagaaactttct
gctttgcgtgacggctgtaaagccaatggtcaccgcaacgactttgaccgtaaagattta
gctgctgaccttcaggctaaatttggcgaattcagtaaggaagaattagaagcgcaggac
aatcaggttgctgttgcgggtcgcatcatgttccaacgtggcccatttactaaaatcaat
gacgcttctggcggtattcagttttacgtccctaaagatgtgcaaaaagaaattaactac
aagtctaaatttgatttaggtgacatcgtaggtgcacgcggcgctttacataagtcaggt
aaaggcgaactttatgttaatgtggcgactgcagacgacttgatcatgttaaccaaatca
ctgcgtccattgcctgataagttccatggtttagcggatcaagaaattaaatatcgtcag
cgctatgtggatttaattatcaaccaagaaacccgtgatttgttcatggtgcgttctaaa
attattgaagccatgcgcaaatacctaagcgatcgcaactttatggaagtggaaacgccc
atgctacaagcgattcctggtggtgccacagcaaaaccatttgaaacacaccacaatgcg
ctgggtattgatatgtacttacgtatcgcgccagagttgtatttgaagcgcttgctagta
ggcggcttcgaacgtgttttcgaaattaaccgtaacttccgtaacgaaggtttgtctact
cgacataacccagagttcaccatgattgaattctaccaagcgtatgcgacgtatcatgat
ttgatggacactacagaagatatgctgcgtaacatcgcgcaagacgtgctgggtacgacc
gacattgtatcaacggaaaaagacgctgaaggcaatgtggtcaacgaaaccgtatacgat
tttgctaagccgtttgcgcgcctcactatgatggaagcggtattgaaatataaccctgac
ttcgatgaagctgtgattaacgacccagaaaataacttggataaactaattgcatacggt
cgccaagtaggtatcagagaagatgctaagcaaagtgcttggggtgccggtaagtggtta
tgtgagatttttgaggagaccgcagagcacaaacttgatcagccaacctttattacggct
tatccatgggaagtttcgccgcttgcccgtcgtaatgatgaaaacccattcataactgat
cgcttcgaattctttgttggaggtcgcgagttggctaatggcttctcagagcttaacgac
gccgaagatcaagcagagcgtttccgtaagcaagtggaagaaaaagatgccggtgatgat
gaagccatgcactatgatgcggattacgtgcaggcacttgagtacggcatgccacctgcc
gctggtgaaggcattggtatcgaccgtttggtgatgctatttaccgatagcccaaccatt
aaggacgtgattttgttcccacacatgcgtcctcgtggatga
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