Bermanella marisrubri: HF888_05360
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Entry
HF888_05360 CDS
T06527
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00230
Purine metabolism
bmar01100
Metabolic pathways
bmar01120
Microbial metabolism in diverse environments
bmar01232
Nucleotide metabolism
Module
bmar_M00958
Adenine ribonucleotide degradation, AMP => Urate
bmar_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HF888_05360 (xdhB)
Enzymes [BR:
bmar01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
HF888_05360 (xdhB)
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
QIZ83684
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Position
1170408..1172774
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AA seq
788 aa
AA seq
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MSFISSRLEPYEQRRKRPAKGKSGKSLAHESAEKHVTGEAVYVDDMPELAGTLHMAVAQS
TEAHANIVSMDLTKVFQAQGVVDVITLDDVPGEADIGPVFKGDPLFADKKVEYVGQPLFA
VVAQSLAQAKRATKLAEVEYEVLPSVLEIEQALEQNFFVRPSHSMQKGDFQTAYNKAPNR
LENTVYVKGQEHFYLEGQVSYVVPTEDKGMKVYTSSQHPTEVQKLVAEVLDLPMNYISVE
VRRMGGGFGGKETQAAPWACMASVAANKLKRPVKLRLPRQDDMVMTGKRHDFLNQYRVAF
DESGKILATDIMVAGKCGYSPDLSDAIVDRAMFHSDNAYDLGDCQVVGHRCKTHTVSNTA
FRGFGGPQGMTIAEYMVDDIARAVGKDPLEVRKLNLYQDGSSTHYGQVVENYHMRELIEQ
LEKDCDYQTRRQAITEFNKNHTYKKRGLALTPVKFGISFTVQFLNQAGALVHVYTDGSIH
LNHGGTEMGQGLFTKVAQVVANEFDVDIDTVQVSSTNTEKVPNTSPTAASSGTDLNGKAA
QNACLTIKQRLIDFASDYFKVEPSEIRFENNHVLIGSGDNLEEMTFQAFVELAYLNRISL
SSTGYYSTPKIHYNREKADGRPFFYYAIGAACSEVEIDTLTGEYDVLSTNIIHDVGQSLN
PAIDIGQIEGGFIQGMGWLTTEELNWDGHGRVTSNGPANYKIPTTMDMPKEFNVKLFDRI
NEEQTIYNSKAVGEPPLMLGMAVWLALRDAAASVADYKVNPPLNAPATPEQVLRAVQYCQ
RHLEGRAS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatatccagtcgattagaaccgtatgagcagcgtcgcaagcgtccagccaag
ggcaaaagtggaaagtctttagcccatgaaagtgccgagaaacacgtaacaggtgaagcg
gtttatgtagatgatatgccagagttagcaggcacactgcatatggcggttgcgcaaagc
accgaggcccatgccaatattgtgtccatggatttaactaaggtcttccaagctcaaggg
gtggtggatgtcattacgttagatgacgtgcccggtgaagccgatattggtccagtattc
aaaggtgaccctctttttgcagataaaaaagttgagtatgttgggcagcctttgtttgca
gttgtcgctcaatctctagcgcaggcaaagcgcgcaactaagttggctgaagtagaatac
gaagttttgccatctgtactggaaattgaacaagcgttagagcaaaacttttttgttcgc
ccgagccactccatgcaaaaaggggattttcaaactgcttacaacaaagcgccaaaccgt
ttagaaaatacggtatatgtaaaaggccaagaacacttttatcttgaagggcaagtgagc
tatgtcgtgcctaccgaagacaaaggcatgaaggtctatacaagttctcagcatccaact
gaagtacaaaaactggttgctgaagtactagatctacctatgaattatatcagtgttgaa
gtgcgtcgtatgggtggaggctttggcggtaaagaaacccaggcggctccgtgggcgtgt
atggcctctgttgcggctaacaaattaaagcgtccagtgaagcttcgcttaccacgccaa
gacgacatggtcatgactggtaagcggcacgactttttaaatcaatatcgtgtagccttt
gacgaatccggcaaaattttagccacggatattatggttgcgggtaaatgtggttatagc
cctgacttatcggatgctattgtcgatcgcgccatgttccatagtgataacgcttatgat
ttaggtgattgtcaagtggttggacatcgctgcaaaacgcacacagtgagcaacaccgca
tttcgtggttttggcggtcctcagggtatgacgattgcggaatacatggtggacgacatc
gccagagcagttggcaaagacccgcttgaagtgcgcaaactcaacctttatcaagatggt
tccagtacccactatggtcaagtggttgaaaactaccacatgcgtgaattgatcgaacaa
ttagaaaaagactgcgattatcaaacgcgtcgccaagccataaccgaatttaataaaaac
catacttataaaaagcgtggtttagcgttaacgccggtaaaatttggtatttcatttacg
gttcagtttttgaatcaggctggtgccttagttcatgtttatacggatggtagtattcat
cttaatcatggcggtacggaaatgggccaaggattattcacgaaagtcgcacaagtggtg
gccaatgaatttgatgtggatatagataccgtacaggtgagcagtaccaataccgaaaaa
gtccctaacacatcgcctacagcggcttcctctggtacagacttgaatggtaaagcggcg
caaaatgcgtgcttgaccattaaacagcgattgatcgattttgctagtgattactttaag
gttgaacccagtgaaatacggtttgaaaacaatcacgttttgattggatctggtgataac
cttgaggaaatgacttttcaagcatttgttgaactggcttatttaaatcgtatttcgctt
tcttcaaccggctattacagtacacctaaaatccattacaaccgggaaaaggcggatggt
cgcccgttcttttattacgccattggtgcggcctgcagtgaagtcgaaattgatacgcta
acaggtgagtatgatgtattaagtactaatatcattcacgatgttggtcagtctttaaat
cctgcgattgatatcggtcaaatagaaggtggctttattcaaggcatgggctggctgaca
acagaagaattgaattgggacgggcatggccgtgttacatctaatggccctgccaattat
aaaattccaaccactatggatatgcccaaagaatttaatgtgaaactctttgatcgtatc
aatgaagagcaaaccatttataactccaaggctgtgggtgagccaccgctcatgctgggt
atggcggtttggttggccttgcgggatgcggcggctagtgttgcagattataaagtaaat
ccgccgttaaatgccccggcgacaccagagcaagttttacgtgcggtacagtattgtcag
cgccatcttgaaggtagagcgtcatga
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