Bermanella marisrubri: HF888_06035
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Entry
HF888_06035 CDS
T06527
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
HF888_06035
Enzymes [BR:
bmar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HF888_06035
Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HF888_06035
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Mltc_N
SLT_4
DUF3306
Aldolase
Motif
Other DBs
NCBI-ProteinID:
QIZ83807
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Position
complement(1305274..1306464)
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AA seq
396 aa
AA seq
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MTHFYRLFMCICFAWYSQTSIAIQVIPKGLDTTPPESIEISEEAFRENFTKAVSEYRNTL
RQYWPDAEISSRTRLVMYADDYQKKQAIDFKANELQITMASIRQGKVLNYRAMQEALNDT
IQAILTLDLQTAIANDPINQKMEQLSGIRYASDLGAMGRDLILSELFPNERPSIKAIERM
ASKLTKEAYIRYPAVASTQLTFIMQDRTTYIVPLPEKRIRKRARRYKPFIYEYAQQYSLP
PSLVFAVIHAESSFNPLARSQIPAFGLMQIVPHTAGKDATKLVYSRSRVLSPSYLYNPQK
NVRIGAAYLHLLYYRYLSEIQDPKTRIYCAIAAYNAGLSSVMRTLTGVPSINRATDAINR
MDSNQVLRTLVRQMPSAETREYLSKVLKLQKTYGNI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatttttatcgcttgttcatgtgcatttgctttgcttggtatagccaaacgagt
atcgcgattcaagttatccctaaaggtctggacaccacgccaccagaatccatcgagata
agcgaagaagccttccgcgagaactttacaaaagcggtgagcgaatatcgcaatacacta
aggcagtattggcctgacgcagaaatcagtagtcgaacacgacttgtcatgtatgctgat
gattatcaaaaaaaacaggctattgatttcaaggcgaacgaattgcagatcacaatggcc
agcatccgacaaggtaaagtcttaaattaccgcgccatgcaagaagcgctcaatgacaca
atacaagcaattctaacattggatttgcaaacagctattgctaacgaccccatcaatcaa
aaaatggagcagttatctggcatccgctacgcctctgatttgggtgccatgggaagagat
ctcattctaagcgagctatttccaaacgagcgcccaagtatcaaagctattgagcgcatg
gcgtcaaaacttacaaaagaggcctatatccgctatcccgcagtcgcgtctactcaactc
acttttattatgcaggatcgcactacttatattgttcccctaccggaaaagcgtatccgt
aaacgagctcgacgttacaaaccattcatctatgaatacgcccagcaatacagcctgcca
ccctcgcttgtgtttgcagtgatccatgcagagagtagtttcaatcccctagcgcgttca
caaatcccagcatttggtcttatgcaaatagtgcctcacacagcaggcaaagacgcaacg
aagttggtctatagtcgcagtcgagtgttatcgcctagttatttgtataacccgcaaaag
aatgtgcgtattggcgccgcgtatttacacctattgtattatcgctacctcagcgaaatt
caagatcccaagactcgtatctattgtgctatcgccgcatacaatgctggcttaagcagt
gtaatgcgtactcttactggagtacccagcatcaatcgcgcaacagacgccatcaaccgc
atggattccaaccaagtactacgaacgctggtgaggcaaatgcccagtgcagaaacccgc
gaatacctaagtaaagttcttaaactgcagaaaacttatggaaatatttaa
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