KEGG   Bermanella marisrubri: HF888_06555
Entry
HF888_06555       CDS       T06527                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
bmar  Bermanella marisrubri
Pathway
bmar00521  Streptomycin biosynthesis
bmar00523  Polyketide sugar unit biosynthesis
bmar00525  Acarbose and validamycin biosynthesis
bmar00541  Biosynthesis of various nucleotide sugars
bmar01100  Metabolic pathways
bmar01110  Biosynthesis of secondary metabolites
bmar01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:bmar00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    HF888_06555 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HF888_06555 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    HF888_06555 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HF888_06555 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    HF888_06555 (rfbB)
Enzymes [BR:bmar01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     HF888_06555 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short Sacchrp_dh_NADP KR NmrA
Other DBs
NCBI-ProteinID: QIZ83909
LinkDB
Position
1417976..1419061
AA seq 361 aa
MSKKILVTGGAGFIGSAVVRHILNDTHDSVVNLDKLTYAGNLESLNEIAGSERYAFEQVD
ICDRPALERVFAEHKPDAIMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEVARAYWNGL
PEKQKNSFRFHHISTDEVYGDLENPEDLFTEETAYAPSSPYSASKASSDHLVRAWKRTYG
FPTIITNCSNNYGPYHFPEKLIPLVILNALEGKELPIYGKGDQVRDWLYVEDHARALYKV
VTEGQIGETYNIGGHNEKQNIEVVQTICELLEELVPENAYSRMGGNPSGFKGLIAYVEDR
PGHDLRYAIDASKIQKELGWTPLETFESGIRKTVEWYLSNKEWVQHVQDGSYQRERLGVS
V
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtcaaaaaaaatactcgtaacaggtggtgctggattcatcggttcggcagtcgttcgc
catattttgaatgatacgcacgattcagttgttaatcttgataagttaacttatgccgga
aacttagagagcctgaatgagatcgccggttctgagcgatacgccttcgagcaggtcgac
atatgtgatcgaccagcgttagagcgtgtgtttgctgagcataaaccagatgcgataatg
catctagcggcggaaagtcatgttgatcgttcaattgacggtcctgcggccttcattgaa
acgaatattgtgggaacgtacacactcttagaagttgctagagcgtattggaatggatta
cctgaaaaacaaaagaattcattccgatttcatcatatatcaactgatgaagtatatggt
gacctcgaaaacccagaagatctatttactgaagaaacagcttatgcaccaagctctcca
tactccgccagtaaggcaagttcggatcatcttgtaagagcatggaagcgtacttatggc
tttccaactataataacgaactgctcaaacaattatggcccatatcattttccagaaaag
ctaattccacttgtaattcttaatgctttagaaggtaaagagttacccatctatggtaaa
ggtgaccaagtgcgcgactggctctatgttgaggatcacgcacgagctctatataaggta
gttaccgaaggtcaaatcggtgaaacctataatattggtggccacaatgaaaagcagaat
atagaagttgttcaaaccatttgtgaattacttgaggaactcgttccagagaatgcttat
tctcgaatgggcggtaatccatcaggattcaaaggacttattgcatatgtagaagatcgc
ccaggccacgatcttcgctatgcaattgatgcaagtaaaatccaaaaagaattgggttgg
acgcctttggaaacctttgagtcaggtattcgtaaaaccgttgaatggtatctctcaaat
aaagagtgggtgcagcatgttcaagatggtagctatcaacgtgagcgtctaggagtgagt
gtatag

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