Bermanella marisrubri: HF888_06790
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Entry
HF888_06790 CDS
T06527
Symbol
rluF
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmar03009
]
HF888_06790 (rluF)
Enzymes [BR:
bmar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
HF888_06790 (rluF)
Ribosome biogenesis [BR:
bmar03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HF888_06790 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
QIZ83950
LinkDB
All DBs
Position
1471080..1472210
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AA seq
376 aa
AA seq
DB search
MLNDSTTRLNKYISESGICSRREADRYIEQGNVYINGKRAEVGDRVAPGDTVKVNGQIIE
PQEPEDFVFIALNKPVGIVSTTESSERNNIVRFVGHSTRIFPIGRLDKDSQGLIFLTNNG
DLVNKILRAGNDHEKEYLVEVNKPIRDNFIEGMANGVPILGTMTKKCKVKKESPTVFRIT
LVEGLNRQIRRMCEYFGYDVVALERVRIMNVDLKGLATGDWRDLTQKELNGIFDAIKDSS
SEAPAGRKTTQKRGGKPGGSGQNKPGNKTNSKKPAAKASKSGPKRGGPHKAKKTSGNPNT
KHPPKPPGGKPSGKPSPKGKAGGKPSGKPMKGGKPSPKGKAGGKPFGKPMKGGKPGAKGK
AGGKPAGKPAGKKGRR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgattccacaacccgtctcaataaatacatcagcgaaagtggtatctgctct
cgtcgtgaggccgatcgctacattgaacaaggcaatgtctatatcaatggtaagcgtgcc
gaggttggggatcgggtagcgccgggtgatacggtcaaagtgaacggtcaaatcattgaa
ccgcaagagcctgaagattttgttttcatcgccttgaacaaacccgtaggcatcgtgagt
accaccgaaagcagcgaacgcaataacatcgtacgctttgtgggtcacagcactcgtatc
tttcccatcggtcgtttagataaagactcccaaggtctgatctttttaaccaataacggc
gacctggtgaacaagattctgcgcgcgggtaacgaccacgaaaaagaatacctggtggaa
gtgaacaagcccattcgcgataacttcatcgaaggcatggctaatggcgtgccgattctg
ggcaccatgaccaaaaaatgtaaggtgaaaaaagaatcgcctacggtgtttcgcattacc
ttggtggaagggcttaaccgtcaaatccgtcgcatgtgtgaatactttggttacgacgtg
gtcgccctagagcgcgttcgcattatgaatgtggatttgaaaggcttggccacaggcgac
tggcgcgatctcacgcaaaaagaactaaacggcatattcgacgccattaaagattcctcc
tcagaagcgccagcgggacgtaaaaccacacaaaagcgtggtggcaaaccgggtgggtct
ggacagaataaaccgggcaataaaaccaatagtaaaaagccagcggcgaaagcctcaaaa
agtggtcctaagcgcggcggccctcataaagcgaaaaaaacaagcggaaaccctaatacc
aagcatccaccgaaaccccccggcggcaagccatccggcaagcccagcccaaaaggcaaa
gcgggtggtaagccatcaggcaaacctatgaaaggcggcaaaccaagcccaaaaggcaaa
gcaggcggtaagccattcggcaagccaatgaagggcggaaaacccggagcgaagggaaaa
gcagggggcaagccagcaggaaaacccgctggcaaaaaagggcgtcgctag
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