Bermanella marisrubri: HF888_06980
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Entry
HF888_06980 CDS
T06527
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmar02000
]
HF888_06980
Transporters [BR:
bmar02000
]
Other transporters
Pores ion channels [TC:
1
]
HF888_06980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QIZ83986
LinkDB
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Position
complement(1512942..1515311)
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AA seq
789 aa
AA seq
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MNLKECFIHAPLALAISAAFSAQVSADQTSPDQENDTSNDQATAYFESVVVTGQKTERSL
QDTVDSVKIIDAEQLEDERLTDIYDVFDRSPNVAQVTGTGNSFTIRGIDALGVSGGGNSY
LASMYLDGAPLSYRALKQGTSVWDVSQVEILRGPQSTLQGRNSLAGAILIRTEDPTYDTD
AKARLIAGSHGRKEVAVAAGGSIIDDELAFRIAAEKREFDGYIENPNRDENANYSEGHNV
RAKVLFEPNAIENLKVLFTHHQNDDEVGVPWQSLNSPDRYDDPQVYFNDRTREKVKGQHN
ILDASYRINNNLTFNAITSHSDVDYHYDWDGDTGADLNAVLIDDRNEETLTQEFRINISY
DNLTGVVGAYYSDLAVDDFSKGNRLINLAEYGINADALIALGASQGVTLDENTAAFLTSQ
YPEYGELYYESGFETDVTTQALFADFTYSLNQNIDILAGVRYDTEEQGNQSSDVVTLETD
LPDPAAVGAQVEQSQGAAAGQQAAGAIQLINGYLVNFVDGANGTKPPVDDDFAAWLPKLG
VTYHFTDDVSSSFVAQRAYRSGGVGVNLAEGRVFTYDPEYVNNYEFSTRTMWLDGMLSAN
TNIFYLDWTDQQVEIRGDKGQFDTDTVNAGESNVKGAEIELMYYDGMFSSYFGLGHSRTE
FTKFMDDEDNLEGRSFTNAPEWTANIGATYRTLNGFILNANANYQDSSYVRVNPNLGQGT
TFDPKNDARTIVNTSIGYEWSKFKITLAVDNLLDEEYVLAASRDPSQRTASEVIGAPRTY
SVTLQASMW
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgaaagaatgttttattcacgcacctcttgcgctagcaattagtgccgctttc
agtgctcaagtgagtgcagatcagacctctcctgatcaagaaaacgatacttccaatgat
caagccacagcgtattttgaaagtgttgtcgtaactggccaaaaaacagaacgtagcctt
caagacacggttgatagcgtaaaaatcatagatgccgagcaattagaagatgaacgctta
acagatatttacgatgtgtttgatcgttctccaaacgtggcacaagtaaccggtacaggt
aatagcttcacaattcgtggaatcgacgctcttggtgtttctggcggaggtaacagttat
ctagcaagtatgtacttagacggcgcgcctctatcgtatcgcgctctcaaacaaggaaca
tccgtgtgggatgtctcacaagtagagattctgcgtggtccacaatcgacattgcaaggg
cgtaactcacttgcgggtgccatattaatccgtacggaagatccaacatacgacaccgac
gcaaaagcccgtttaatagctggtagtcatggccgcaaagaagtagcggttgccgctggt
ggttcaattattgatgacgaactcgcttttcgtattgcggcggaaaagcgcgagtttgat
ggttacatcgaaaacccgaatcgcgatgaaaatgccaactactctgagggccataatgta
agagcaaaagtgctttttgaaccaaatgccatcgagaatttaaaagtcttattcacccac
catcaaaacgatgacgaagtgggcgtaccttggcaatcattgaattctccagatcgctat
gacgacccccaagtgtatttcaatgatcgcacacgagaaaaggtgaaaggacagcataat
attttggacgctagttatcgtataaacaacaacctaacgtttaatgccatcacttcacac
agcgatgttgactatcactacgattgggatggagacaccggcgccgatttaaatgctgta
ctaattgacgatcgcaacgaagaaactctcacccaagaatttcgcattaacatcagctat
gacaacttaacgggtgtcgtaggtgcctattattccgacttggctgttgacgatttttct
aagggtaaccgtctcattaacctagcggaatacggtatcaacgccgacgctttgatagcc
ttaggtgcaagccaaggcgtaactcttgacgagaatactgccgcgtttttgaccagccaa
taccctgaatatggtgaattatattacgaaagtggtttcgagactgacgttactacacaa
gccctctttgcagactttacttacagtctaaatcaaaacatcgatatcttagccggagtt
cgctacgacactgaagagcaaggaaaccaaagtagcgatgtcgtaacacttgagacggat
ttacccgatcctgcagcagtcggcgctcaagttgaacagagtcagggcgcagccgcaggt
caacaagctgcaggagccatacaattaatcaacggctacttggttaactttgttgatggt
gccaatggtaccaaacctcccgtcgacgacgattttgctgcttggctacccaagcttggt
gtgacctaccattttaccgatgacgtatcgagtagctttgtcgctcaacgagcctatcgt
tctggtggcgttggcgtcaacttagccgagggccgtgtatttacctatgacccggaatac
gtcaacaactatgaattctctacgagaaccatgtggcttgacggcatgttaagtgccaac
acaaatatcttctatttagactggaccgatcaacaggtagaaataagaggcgacaaaggt
cagttcgatacagacactgtgaatgcaggtgaatccaacgtaaaaggtgcggaaatcgaa
ttgatgtattatgacggtatgttcagcagctatttcggcttaggccatagtcgaactgaa
tttaccaagttcatggatgatgaagacaatctagaaggtcgcagctttaccaatgctccc
gaatggactgcaaacattggtgctacatatcgaaccttaaacggctttatattgaatgct
aacgccaattatcaggattcttcctatgtgcgagttaaccctaatttaggtcaaggtact
acattcgaccctaaaaatgacgctcgtacaatcgtcaacacatcaatcggatatgaatgg
agtaagttcaaaataacactggcagtagacaatctacttgacgaagaatatgtactggct
gctagtcgagatccatcacaacgcactgcctcagaagtcattggtgctcctcgcacatat
tctgtcacactgcaggccagcatgtggtga
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