KEGG   Bermanella marisrubri: HF888_07210
Entry
HF888_07210       CDS       T06527                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
bmar  Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:bmar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bmar02044]
    HF888_07210 (tssC)
Secretion system [BR:bmar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HF888_07210 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 T6SS_VipA
Other DBs
NCBI-ProteinID: QIZ84031
LinkDB
Position
complement(1572179..1573867)
AA seq 562 aa
MMGNVTDRINLVYENHDNQMVELPFKIMVLSDFTHDTRSEEIHDGSIHKLEGDVDQLLAG
FHINLQFNIKNFLLGTEGAADIAIDLPISSLEDFAPENILLSIPELNQAYQLYRQLGEPS
ISLDKLASSEDNSVLHVDPTWDFTDRLIAQEALWDRINKQLNAIIHADSFNQVETSWRSL
GYIADHIDSRENIELVVCNISKQALMEDFEDSPDVTQSSLYSKVYTDEFGQFGGRPYSMI
VADYEFGPRQQDIALLSSLAQLAEISHAPLLSAASSQLFGISNYHEFSNIRDVAAHFDQP
QYTKWNSFRDKSFSRYVCLTLPKFQVRPPHHIVDAGFEFVEDGKEQSGIWANAAYGLATR
FINSFKEYRWFINVSGEEYGLLDNINMHESKNQLGQLIPTEVLVSDRIGNQLINNGFTPL
SIFRKSGQAGFIAVPSCHRLDLDDSDSQSLLNQTLETQIPYMLICSRFSQYIKVMQRENI
GSWLTRSQINQSVNQWLKQYVSDMDNPAPAVRARRPLRNASVQVRDVEGKSGWFMSTISI
TPHFKYMGKSFTLMERGRLEKA
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgatgggaaatgtaacagatagaatcaatctcgtttatgagaaccatgataatcaaatg
gttgaattaccatttaaaatcatggtgctatcggatttcactcacgatactcgaagtgaa
gaaatccatgacggctctattcataaacttgagggcgatgtggaccagcttctagctggc
ttccatattaaccttcaattcaatatcaaaaacttcttactaggtactgaaggtgcagca
gatatcgctattgatctgccgatatccagccttgaagattttgcacccgagaatatttta
ctatcgattcctgaactgaatcaggcctatcagctatatcgtcaattgggtgaaccctct
atttcgctcgataaattagcttcaagtgaagataactcagtattgcatgttgatccaact
tgggatttcactgatcgactcatagcacaagaagccttgtgggatcgcatcaataaacaa
ttaaacgccatcattcatgctgattcttttaatcaagtggaaaccagctggcgtagtcta
gggtatatcgctgatcacattgatagtcgagaaaatatcgaactggttgtatgtaacatc
tccaaacaagcattaatggaagacttcgaagacagcccagatgtcacccagtctagcctc
tatagcaaagtctatacggatgagtttggccagtttggtggtcgcccctattctatgatc
gtggccgactatgaatttggtccgcgtcagcaggacatcgccctgctttcgagtctggct
cagttggctgaaattagtcatgcccctttgcttagtgccgcatccagtcagcttttcggc
atttcaaattaccatgaattctcaaatattcgtgatgtagcagcgcactttgatcagcct
caatatacaaaatggaatagcttccgcgataaaagcttcagccgatatgtgtgtttgaca
ctaccaaagtttcaggtcagaccgccccatcatattgttgatgctgggtttgagtttgtt
gaagacggaaaagagcaatctggtatctgggcaaacgcggcctatgggcttgccactcga
tttatcaacagctttaaagagtaccgttggtttatcaacgtgagcggcgaggagtacggc
ctactcgacaatatcaatatgcatgagtcgaaaaatcagttgggccaactgattccgact
gaggttctcgtatctgatcgtatcggcaatcaacttatcaataacggttttactccacta
tcgattttccggaaatctgggcaagcaggatttattgccgttccttcttgtcatcgtttg
gatcttgatgatagcgatagtcaaagcctactcaatcaaaccttggagacgcaaatccca
tatatgttgatttgtagtcgcttctctcaatacatcaaagtcatgcagagagaaaacatc
ggttcttggttgacgcgtagccaaataaaccagtctgttaatcaatggttaaaacaatac
gtatcagatatggataacccagctcccgcagtaagagctcgtcgtcctctgcgaaatgca
agcgtacaggtacgcgacgtagaaggaaaatccggatggttcatgtcaaccatctctatc
actccacattttaaatacatgggtaagtcgttcacgctcatggaacgtggtcgtttggaa
aaagcgtaa

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