Bermanella marisrubri: HF888_08205
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Entry
HF888_08205 CDS
T06527
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmar03021
]
HF888_08205
Transcription machinery [BR:
bmar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HF888_08205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
SNF2-rel_dom
Tudor_1_RapA
Helicase_C
ResIII
Tudor_RapA
DEAD
Flavi_DEAD
Cas3-like_C_2
Bcl-2
Motif
Other DBs
NCBI-ProteinID:
QIZ84210
LinkDB
All DBs
Position
1793178..1795874
Genome browser
AA seq
898 aa
AA seq
DB search
MPQYIEGQRYVSLAEPELGLGVVTGYENRQITIEFPLSETTRLYSANTTPLLRCRFEPGD
TVKTRTGEFICVSSSEEVDGLIEYHYDGNHSISEIMIADDQGKVSPLDRLKSGQLGSYKW
QNLYQKLDRSMIEHQGRGSYGFVGPKINLVPHQFDVAQQVLSMPLPRALLADEVGLGKTI
EAGLVIHQLMVSGRAQRILICVPASLVNQWLVEMRRKFNLNCTLIDDEFCQNQEGSNPFN
QVQVALCNFDWLTHSQYMEQALSTQWDMMVIDESHRLQWQSEAYRSALALSKVSSGALLL
TATPEQLGVESHFARLHLLDPLRFPDLEQFLNEEKQYALVSELVDRIEMEGLAACLADIE
ALDDQRLSELANDYVENGKDEQQFVDWMSDRYGTGRMVYRNTRRSIAGFPQRHIEFHHLK
DQSHEEWLKEWLESLGDEKVLIICKQAEQARDLSEFINTHTLIESGAFHEGYSLIERDQI
AAQFVEPDGLQILVSSEIGGEGRNFQHAKYLVLYDLPSHPDLVDQRIGRLDRIGQGSDIY
VHIPLQSRSEQSRLAALYHHGLDLFNQPNPAAAPIYEAYSYEIEDMLETGENAEAVIMQC
QQACFQLLDEIEQGRDKLLEQHSFSKDRVSPLLDSIKELDEEQDTLRHALFDIFDHSHID
IETAGAGNFVVRPGENCPFSFMNDIQEEAATITFDRNKAALREDLEFISWDHPWMRGMLD
DLEAAGNAYTACALFEDDKLANGTAVVECYFDFKANGPGRLELNRYLAPQSRRYFITEDL
KNATSHLSEEDMTERFKPISKEMAREAIELKWGSIQNAAMLAEKLAIHTTQNSIGEAVEK
LLDQSKSELARYKSLEMMPGAYQAEIDALTTRTKEAIGLLQNAKPQLKSITVWINYRD
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgccacagtacattgaaggtcagcgctacgtaagccttgccgagccagagctcggctta
ggtgtcgtcaccggttatgaaaaccgacagatcacaattgagtttcccttgagtgaaacc
actcgattatattcagctaataccactcctttattgagatgtcggtttgagccaggcgat
acagtaaaaacccgtactggggagtttatttgcgtctccagttctgaagaagtcgatggc
ttgattgaatatcactacgatggcaatcatagtattagcgaaataatgattgctgatgac
caaggtaaagtctccccgctcgaccgcctgaaatctggtcagctgggtagttataaatgg
caaaacctttatcaaaagctagaccgatctatgattgaacatcaaggtcgcggaagctat
ggctttgtaggaccgaagatcaatcttgtaccccatcagtttgatgtggcacaacaggtt
ttgtcgatgcctcttcctcgtgcattgttggctgacgaggtaggtctaggtaaaaccatt
gaagctgggctagttattcatcaactgatggtatccggtcgcgctcagcgcatcttaatt
tgcgtaccagcgtctctcgtcaatcagtggcttgtagaaatgcgccgtaagttcaatttg
aactgtacactgattgatgatgaattctgtcaaaaccaagagggttcaaaccctttcaat
caagtccaagtagccctttgtaattttgactggctaacccacagtcagtacatggaacaa
gcgttaagcacacaatgggatatgatggtgatcgacgaaagtcatcgcctgcaatggcaa
tccgaggcgtaccgcagtgcactggcattatcgaaagtcagctctggtgctttattatta
acagcaacgcctgagcagcttggcgttgaaagtcacttcgcgcgcttgcacctgctagat
cctctgcgtttcccagatttagagcaatttcttaacgaagaaaagcagtatgccctcgtc
agcgaattggttgatcgtattgaaatggaaggcctggctgcttgtcttgcagacatagaa
gcattggatgaccaacgtcttagcgagctcgccaacgactatgtcgaaaacggaaaagat
gagcagcaattcgtagactggatgtcggatcgatatggcactggccgtatggtttaccga
aatactcgccgttccatcgctggctttcctcagcgccatatagagtttcatcacttaaaa
gatcagtcccatgaagaatggttgaaggaatggctcgaatcccttggtgatgaaaaagtc
ctaattatatgtaagcaggcagagcaagcgcgtgatttaagtgaattcattaatacgcat
acattaatcgaatcgggcgcattccatgaaggctacagcttaattgaacgcgatcaaatt
gctgcacagtttgttgagcccgatggcctgcagattttggtttccagtgaaatcggcggt
gaaggtcgtaacttccaacacgcaaaatacttggtgctatatgatttacccagccaccct
gacttggtagatcagcgcataggtcgtttggatcgaatcggtcaaggcagtgatatatat
gtgcatattcctttgcagtctcgttcagagcaatctcgcttagcggcactttatcaccat
ggcttagatctttttaatcaaccaaaccctgctgcagcgccgatttatgaagcttattcc
tatgaaatagaagatatgctggaaaccggtgaaaatgccgaagcggttattatgcagtgc
cagcaagcatgttttcagctgctagacgaaatagaacaaggtcgcgataaactgttagag
cagcattctttttcgaaggatcgtgtatctccactgctcgattcaattaaagaactggat
gaagagcaagatacgctgcgccatgcgttgttcgatattttcgatcatagtcacattgac
atcgaaacagctggggccggcaattttgttgttcgtcctggtgaaaattgcccattctct
tttatgaatgacattcaagaagaagccgcgaccattacatttgatcgaaacaaggcagct
ttgcgtgaggatcttgaatttatttcttgggaccacccttggatgcgcggcatgcttgac
gatctagaggctgcaggtaatgcatatacagcatgcgcgctatttgaagatgacaaactt
gccaacggtacagctgttgttgaatgctatttcgacttcaaagccaatggtccaggtcgc
ttagaattaaatcgctacctagcacctcaaagtcgtcgttactttattacagaagactta
aaaaatgccactagccatttaagcgaagaagatatgactgaacgctttaaacccatcagt
aaagaaatggcgcgcgaagccatcgagcttaagtggggatccatccaaaatgctgcgatg
ttggcagagaaacttgcgattcatacaacacaaaatagtattggcgaggcggtagaaaaa
cttctggatcaaagcaaatcagaattagcacgttataagtctttggagatgatgccaggt
gcataccaagccgaaattgatgctttaacaactcgaacgaaagaagctattggcttgttg
caaaatgccaagcctcaattgaaatccataacggtttggataaattatagagattag
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