Bermanella marisrubri: HF888_08410
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Entry
HF888_08410 CDS
T06527
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00541
Biosynthesis of various nucleotide sugars
bmar01100
Metabolic pathways
bmar01250
Biosynthesis of nucleotide sugars
Module
bmar_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HF888_08410 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
bmar01005
]
HF888_08410 (kdsB)
Enzymes [BR:
bmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
HF888_08410 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
bmar01005
]
Lipid A
HF888_08410 (kdsB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
QIZ84248
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Position
complement(1838009..1838776)
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AA seq
255 aa
AA seq
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MSDYKIVIPARYGSSRLPGKPLIKLKGKSMIQHVYERALDTGVADIIVATDDDRIKQEAE
SFGAQVVMTSVDHENGTERIAEVARKLKWGDDEIVVNLQGDEPLIPKSLIEITAKGLMDH
SDAGMASICTPLSDAEDGFDPNVVKVVLDSRGMAMYFSRAPIPWDRDLYAKSKDALTDAM
PVYRHIGMYGYRVGFLNQYTQMSSSQIEQVESLEQLRALYHGVKIHMSVIDEPPGHGIDT
PDDVARVESLLGALE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagattataaaatcgtcattccagcacgctatggatcatctcgattaccaggtaag
cctttaattaagcttaagggtaagtctatgattcagcacgtttacgagcgtgcgcttgat
acaggtgttgctgatattattgttgctacggatgatgatcgcattaaacaagaagcggaa
tcgtttggcgcgcaagtagttatgacttctgtggatcacgaaaacggtacagaaagaatt
gcagaggtggcccgaaaactaaagtggggggatgatgagattgtcgtgaatcttcaagga
gatgagcctttaatacctaagtctctcattgaaataactgcgaaaggactaatggatcat
tctgatgcgggtatggcttctatatgcacacccttgtcagatgcagaagacggatttgac
cccaatgttgtaaaagtggtgctcgatagtcgtggaatggcgatgtattttagtcgagcg
ccaattccatgggatcgcgatttatatgccaagtctaaggatgcactaacggatgccatg
cctgtgtatcgtcatattggaatgtacggctaccgtgttgggtttcttaatcaatacact
caaatgtcctcgtcacaaatcgagcaggtggaaagccttgagcagcttcgggctttgtac
cacggtgttaaaattcatatgagtgttattgatgagccccctggtcacggtatcgacact
cctgacgatgttgcacgagttgagtcgttacttggtgcattagagtaa
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