Bermanella marisrubri: HF888_08675
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Entry
HF888_08675 CDS
T06527
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bmar
Bermanella marisrubri
Pathway
bmar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HF888_08675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmar02000
]
HF888_08675
Transporters [BR:
bmar02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HF888_08675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
QIZ84300
LinkDB
All DBs
Position
complement(1885115..1886377)
Genome browser
AA seq
420 aa
AA seq
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MRRRTFLKQTGSMAASVATTLAFPSIVSAVNRKPTIRVVGTHVTLQEEIKRQAEKDLGIN
IEFYPGGSAEVLLKASTNPESFDLYEQWSNSIKVLWRAGAIKPIQVDRIGNWSEINSISK
TGRISERAQLGAGDAPNKLLYVQSDGTLSQKPSDSVSFVPYVHNVDSFGYNASFIEPGIP
YETESWSWLLDKTNSGKVAIVNAPTIGVFDPALAVKAKGLMTFNDIGNLNRRELDQLFEI
IVEYKRRGHFRGTWSSVPNSVYLMQSGQVNIQSMFSPGVASLRGNGIRCLYAAPKEGYRA
WQGVMCLSSACEGERLDAVYQYMNWWLSGWPGAFIAKQGYYISNPDRSRPFMSENEWRYW
YLGQATETNLKGTDAQVSVLAGETRRGGSYQKRFENIVVWNSVMDQYEYSLLKWKEFLLA
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaggcgaaccttccttaaacagacagggagtatggcagccagtgtcgcaacgaca
ttggcctttccctcaattgtgtctgccgtaaatcggaagcctactattcgagtggttggt
acgcatgtcactttacaagaggaaattaagaggcaggcagaaaaggatctcggtataaac
atcgagttctatcccggcggtagtgctgaagttttactaaaggcatcgaccaaccccgaa
agtttcgatctgtatgagcagtggtctaacagtattaaggttctgtggagggctggtgcg
attaagccaatacaggttgatcgaatcggtaattggtccgagatcaatagtatctcgaag
actgggcgaataagcgaacgtgctcagctcggagcgggtgatgctcctaataaattactt
tatgtacaatccgatggtacgttaagtcagaagcccagcgatagcgtgagctttgttcct
tatgttcacaatgttgattcctttggttacaacgcgtcttttatagaaccagggattcca
tatgaaactgaaagttggtcgtggttactcgataaaacaaactctggaaaggtagcaatc
gtaaacgcacctacaattggtgtatttgatccagcgttggctgtaaaagcaaaaggctta
atgacattcaatgatatcggaaacctcaatcgtagagagctggatcagttatttgaaatt
attgttgaatacaagcgccgcggccattttcgaggtacttggtcttctgttccgaattcc
gtttatttaatgcaatctggacaagtcaatatacaaagtatgttttctcctggtgtggcg
agtctgcgcggaaacggtattcgctgtttgtatgcagcaccgaaagaagggtatcgcgcg
tggcagggagtcatgtgtttgtctagtgcttgcgagggtgagcgattagatgcggtttat
caatacatgaattggtggctatctggatggccgggtgcattcattgctaagcaaggatat
tacatttcaaatcctgatcgctcgcggcctttcatgagtgaaaatgagtggcggtactgg
tatttggggcaggctaccgaaaccaatttaaaaggcacagatgctcaggtttcggtattg
gctggagaaactcgtcgcggtggttcgtatcaaaagcgtttcgagaatatcgttgtttgg
aatagtgtaatggatcaatacgaatacagcttgctaaagtggaaggagttccttttagca
tga
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