Bermanella marisrubri: HF888_11620
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Entry
HF888_11620 CDS
T06527
Name
(GenBank) DUF3393 domain-containing protein
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
bmar
Bermanella marisrubri
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
HF888_11620
Enzymes [BR:
bmar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HF888_11620
Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HF888_11620
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mltc_N
SLT
Phage_lysozyme2
DUF2740
Motif
Other DBs
NCBI-ProteinID:
QIZ84830
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Position
complement(2506956..2508023)
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AA seq
355 aa
AA seq
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MKYLTLLVVALVFIMSVRASVLPDNFAHLPDDVQAVLLEYAFFSEQVSQQWGEQASFSSQ
KAYVKYLDDYLSRSRVDFESGIVRVETLANSEPLKQLKSAIVTTLLTPNDPNGVDIYSAS
KVKGDGKPFLLGQVLDHQGQAIAYEWRAKQYADHLIATRLQTTETQQGKKFWVQMELVDD
HNQVAANTVKHWVQTYSDRFNLPESLILGIIETESSFNPFAVSHANAYGLMQIIPSTAGR
DVFEKVLNKTGQPSRQFLFNSQNNILVGSAYLKILRDRYLSKIEHPTSQLYCIISAYNSG
AGNVFKTFADSPRRAIYEINQLSPEAVLWKLRKHQPSLEARRYIEKVLAHQKKYS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatatcttacgcttttagtagtcgcgcttgttttcataatgtcggtgcgtgccagt
gttttgcctgataactttgcccatctgccagatgatgttcaggcagtgctgttggaatat
gcgttctttagtgaacaagttagccagcagtggggtgaacaagccagtttttcctcgcaa
aaagcctatgttaagtacttagatgattaccttagtcgaagtcgagtagacttcgaatcc
ggtattgtacgtgttgaaacactcgccaatagtgaaccgttaaagcaacttaaaagtgct
atcgttacgacattgctcacgccaaatgaccccaacggtgtcgatatttattcggctagt
aaagtgaaaggcgacggcaaaccttttctactggggcaggttttagaccatcaaggacag
gccattgcttatgagtggcgagccaaacaatatgcggatcacttaatcgctactcgactg
caaacaactgaaactcaacaaggaaagaaattttgggttcaaatggaattggtagatgat
cataatcaagtagcagcgaacacagtcaagcattgggtgcaaacctacagcgatcggttt
aatctgccagagagtttgatcttaggcatcattgaaactgaaagctcgtttaatcctttt
gctgtgagtcatgctaacgcctatggtttgatgcaaattattccgtccaccgctggtcgt
gatgtatttgaaaaggtgttgaacaaaacgggacaaccaagtcgtcagtttttgtttaat
agtcaaaacaatatattagtgggcagtgcttatttaaaaatactacgcgatcgttatttg
tctaaaattgagcacccaacgagtcagctttattgcatcatcagtgcgtacaacagcggc
gctggtaatgtttttaaaacctttgcggattcgccaagacgagctatttacgagattaat
caattaagccccgaagcggttctatggaaactacgcaagcatcagcctagtcttgaagcc
agacgctatattgaaaaagttttagctcatcagaaaaagtattcttaa
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