Bermanella marisrubri: HF888_12565
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Entry
HF888_12565 CDS
T06527
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00362
Benzoate degradation
bmar00620
Pyruvate metabolism
bmar00650
Butanoate metabolism
bmar01100
Metabolic pathways
bmar01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
HF888_12565
00650 Butanoate metabolism
HF888_12565
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HF888_12565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bmar02000
]
HF888_12565
Enzymes [BR:
bmar01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
HF888_12565
Transporters [BR:
bmar02000
]
Other transporters
Primary active transporters [TC:
3
]
HF888_12565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
QIZ85002
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All DBs
Position
complement(2705278..2706579)
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AA seq
433 aa
AA seq
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METLLNFWHDSGIYQLEPGQFAMMIVAFGMLYLAIKKGFEPLLLLPIAVGTLMVNIPGAG
LGWSAAEQAIRTGGADVLEQFRTLLGLAANADIATMLDAYHHAETPIYKQAVMLGKTLGF
ENGMLYTFYSMTIASGVAPLLIFMGVGAMTDFGPLLANPKTLLLGAAAQFGIFGTVIGAV
LMTHYGITDFSAMQAAAIGIIGGADGPTSIFIASKLAPELLGAIAVAAYSYMALVPMIQP
PIMKLFTTAEERKIKMEQLRTVSKLEKILFPLAVLVLVAFILPSAAPLLGMFCFGNLMKE
SGVVERLSDTAQNALINVVTIFLGLSVGYKMSSDAFLNWETIAIIVLGLVAFCVGTAAGV
LMAKAMNLFLKTPINPLIGSAGVSAVPMAARVSNKVGLEYNPQNFLLMHAMGPNVAGVIG
SAVAAGVMLSYFG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggaaactttacttaatttctggcacgactcggggatctaccagttagaacccggtcaa
tttgccatgatgatcgttgccttcgggatgctatatctagccatcaagaaaggctttgag
ccattattattgctaccaattgctgtcggtacactgatggtaaatattcctggtgcaggt
cttggctggtctgcagctgagcaagcaatccgtacgggcggtgctgacgtgttagaacag
ttccgtactctgttgggtcttgcggctaatgcggatatagcgactatgctagacgcttat
caccacgcagaaacaccgatttataagcaagcagtgatgttgggtaaaaccctaggtttt
gaaaacggcatgctgtataccttctattctatgaccattgctagtggtgttgcaccgcta
ttgattttcatgggtgtgggtgcgatgactgactttggcccactactggccaacccgaaa
accttactactgggagctgcggcacagtttggtatttttggtacggttatcggcgcggta
ttgatgacccattacggcattactgatttcagcgctatgcaagctgcggcaattggtatc
attggtggtgcggatggcccaacgtcaatttttattgcttctaaactagctcctgaacta
ctgggtgcgatagcagtagcggcctattcatacatggctttggtgcctatgattcagccg
ccgatcatgaagctattcaccactgcagaagaacgtaagatcaagatggaacagctacgt
actgtatccaagcttgaaaagatcttgttcccattagcggtactggtgttagtggctttc
attctaccgtcagcagcgccactactcggtatgttctgctttggtaacttaatgaaagaa
tccggcgtggttgagcgtttaagcgatacagcgcagaacgcgttgatcaacgttgtgacg
attttcttgggtctatctgtgggttacaagatgagttcagatgcgttcttgaactgggaa
accatcgccatcatcgtactgggtcttgttgcattctgcgtaggtactgccgcgggtgtg
ctaatggcaaaagccatgaacctattcttgaaaacgccgattaacccattgattggttca
gcgggtgtatctgctgtgccgatggcagcgcgcgtatctaataaagttggtttagagtac
aaccctcaaaacttcttattgatgcacgccatgggaccaaacgtagccggtgtaatcggt
tctgcggtcgctgctggtgtaatgttgtcttattttggttaa
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