Bermanella marisrubri: HF888_12655
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Entry
HF888_12655 CDS
T06527
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HF888_12655 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bmar01007
]
HF888_12655 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmar03016
]
HF888_12655 (alaS)
Enzymes [BR:
bmar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
HF888_12655 (alaS)
Amino acid related enzymes [BR:
bmar01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HF888_12655 (alaS)
Transfer RNA biogenesis [BR:
bmar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HF888_12655 (alaS)
Prokaryotic type
HF888_12655 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
HydF_dimer
Motif
Other DBs
NCBI-ProteinID:
QIZ85017
LinkDB
All DBs
Position
complement(2721852..2724482)
Genome browser
AA seq
876 aa
AA seq
DB search
MKTAEIRQAFLRYFEENGHTVVASSSLIPANDPTLMFTNAGMNQFKDTFLGQETRNYTRA
ASSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIKFAWGFLTGKDWLN
LPVEKLLVTVYADDQEAYDIWHQEMGLPEDKIIRIGDNKGEKYASDNFWQMGDTGPCGPC
SEIFFDHGDHIWGGKPGTPEEDGDRFIEIWNIVFMQYNRYADGKMEPLPKPSIDTGMGLE
RISAIMQGVHSNYEIDLFQNLIAAAAKATGTQDLSNKSLLVIADHIRSCGFLISDGVMPS
NEGRGYVLRRIIRRALRHGHLLGATDLFFFKLVAALVDEMGDAYPELKQNQAQLEKILKL
EEEQFAKTLDNGMKLLEEAIAELKGDTIPGETVFKLYDTYGFPVDLTADIAREKDLKVDE
AGFESCMEEQKNKARAASNFKVDYTDTLNIEGETDFTGYDHLSDQAKVVSLYKDGNAVES
LNAGEAGMIVLDSTPFYGESGGQVGDTGVLRTADGYEFIVTDTTKQQNNHLHHGEVKAGI
IKAGDTLSALVDEHKRQQTAIHHSATHLLHAALREILGEHVQQKGSLCTYDRLRFDFAHF
EAMTADELAAVERRVNQQIAANTPVQTELMAIDAAKEKGAMALFGEKYDDEVRVLSMGTD
GFSVELCGGTHAKRTGDIGLLKIVSEGGIAAGVRRVEAVVGEAAIKYIQSMDASLNLIAS
QVKTTRDSLEDKVTQLVQKNRQLEKDVQQLKAKLASGAGTDLAAGAKDINGVKVLAAQLD
GADVPAMRSAMDQLKNKLGSGIILLASHDGEKVTLIAGVTKDLLGKVKAGDLVKELAPYV
DGRGGGKPDMAQAGGKKPEGIQDALNAFDAWAQQNL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgcagaaattagacaggcatttttaagatatttcgaagaaaacgggcatacc
gtggttgcttccagttcgttgattcctgcgaacgacccgacgttaatgtttactaacgct
gggatgaaccagttcaaagatacctttttgggacaagaaacccgtaattatactcgtgca
gcctcgtctcagcgctgtgtgcgtgcaggcggaaaacacaacgacctagagaatgtaggt
tataccgcccgtcaccatactttttttgaaatgttgggtaacttcagttttggtgattac
tttaagcgtgaagcgatcaagtttgcttggggttttctaaccggcaaagactggttgaac
ttgcctgtagaaaaattgctagtaacggtttatgccgatgaccaagaagcctatgacatc
tggcatcaagaaatgggtttgccggaagacaagatcatccgcatcggtgataacaaaggc
gaaaagtacgcgtctgacaacttctggcaaatgggtgataccggaccatgtggcccttgc
agtgaaatcttctttgatcacggtgatcacatttggggtggcaagcctggcacaccagaa
gaagatggtgatcgcttcatcgaaatctggaacatcgtattcatgcagtacaaccgttat
gccgacggtaaaatggaacctttacctaagccgtctattgatacgggaatgggcctagag
cgtatctctgccattatgcagggcgttcactccaactacgaaatcgatttattccaaaac
ttgattgccgcagcggccaaggcaaccggtacacaagacttaagcaataaatctctgcta
gtaatcgccgaccatattcgctcttgtggcttcttgatcagtgatggcgtgatgccaagc
aatgaaggtcgtggttatgtgctacgtcgtatcattcgtcgtgcactccgtcacggtcat
ttattaggtgccacagacttattcttcttcaagttagtcgcggcgctggtagacgaaatg
ggggatgcttatcctgaactgaagcaaaaccaagctcagttggaaaaaattctaaaactg
gaagaagagcaattcgctaagacgctcgataacggcatgaagcttttagaagaagccatt
gctgaattgaaaggcgataccattcccggtgaaaccgtgtttaagctttatgatacttac
ggcttcccagtggatttaaccgccgatattgcgcgcgaaaaagacctgaaagtagatgaa
gcgggctttgaatcgtgcatggaagagcaaaagaataaggctcgtgcggcaagcaatttc
aaagtggactacacagatacgcttaacatcgaaggtgaaaccgactttacgggttacgat
catctaagtgatcaagcaaaagtcgttagcctttataaagacggtaatgcggtggaaagc
ttgaacgcaggcgaagccggcatgattgttctggatagtacaccattttacggtgagtca
ggtggccaagtgggcgacacaggcgtactgcgcacggcggacggttatgagtttatcgtt
acggatacaaccaagcagcaaaacaatcacttgcatcacggtgaagtaaaagcgggcatc
atcaaagcgggtgatactttaagtgcattagttgatgagcataagcgtcagcagactgct
attcaccacagtgcaacccacttattgcatgcggctttgcgtgaaattcttggggaacat
gtgcagcaaaaagggtctctatgtacctatgatcgcttgcgctttgactttgctcacttt
gaagccatgacggcggatgaactggcagcggtagaacgtcgagtgaatcaacaaattgcg
gccaatacgccagtgcaaacagaattgatggcgattgatgcggcgaaagaaaagggcgct
atggctctgtttggcgaaaaatacgatgacgaagtacgcgttttgagtatgggtaccgat
ggtttctcggtagaactgtgcggtggtacacacgctaaacgtacgggcgatattggccta
cttaaaattgttagcgaaggtggtatagcagccggtgtacgtcgtgttgaagcggttgta
ggcgaagctgctatcaaatatatccagtctatggacgcgagcttgaacctcatcgccagc
caagtaaaaaccacccgtgatagcttggaagataaggtgacacagttagtacagaaaaac
cgacagctagaaaaagacgtgcagcaattgaaagccaaattggcttctggtgcaggtacg
gatttagcggccggtgctaaagatattaacggtgtaaaagtcttggcggcgcagctagac
ggtgcagatgttccagccatgcgtagcgctatggaccagcttaaaaataaactgggcagc
ggtattatcttgttggcgagtcacgatggcgaaaaagtaaccctaatcgcaggtgtgacc
aaagacttgctgggtaaagtaaaagcgggtgaccttgttaaagagcttgcgccttatgtc
gatggccgcggcggcggtaagccagatatggcacaagctggtggtaaaaagccagaaggg
attcaggatgcattgaacgcatttgatgcgtgggctcagcaaaacctataa
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