Bermanella marisrubri: HF888_13085
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Entry
HF888_13085 CDS
T06527
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00470
D-Amino acid metabolism
bmar00550
Peptidoglycan biosynthesis
bmar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HF888_13085
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HF888_13085
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
HF888_13085
Enzymes [BR:
bmar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HF888_13085
Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
Precursor biosynthesis
Amino acid ligase
HF888_13085
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
TrkA_N
NAD_binding_2
Peripla_BP_4
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QIZ85097
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Position
complement(2810296..2811636)
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AA seq
446 aa
AA seq
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MSQVNALTNYHVVIGLGKTGDSAVRHLLAQGENVIAMDTREEAPFASELRATYPDLQLIE
GGLDASVLINAARIIASPGIPLATDEIQRAIDAGVPVVSDIQVFAEAANAPIIAITGSNA
KSTVTTLVGEMAKQCGLKAAVGGNLGTPALELLNSDIDVYVMELSSFQLEATEHLNAKVA
TVLNISPDHLDRYDSYEGYYQTKYKIFNGCEKAVINLDDNLAQPKTLNCPEQIGFSIDGK
GADFVLDRTAQPWQLIVEGDALLSVDQLKIKGLHNYSNALAALALGHGFGLDMDGMLKAL
KSFPGLDHRCQWIKQVDEVDFYNDSKGTNVGATEAALKGLGPEYAKRIVLMLGGVGKDAD
FKVLRPVIDQYVSKVIVYGQDQDIIAKDLSGVDLDRAESFEQAFEMAYRNADHKGAVVFS
PACASFDMFSGFEARGEAFKSMVEAL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtaaacgcactaacaaattatcatgttgttatcggtttaggtaaaacgggt
gacagtgctgtgcgccatttattggctcagggtgagaacgtgattgccatggatacaagg
gaagaggcgccatttgcgagtgagttacgagctacttatcctgatcttcaacttattgaa
ggtggcttggatgcctcggttttaataaatgcagcaagaatcatagcaagccctggaatt
cctttagcgactgatgaaattcaacgtgctattgatgccggtgtaccagtcgtcagtgac
attcaggtgtttgcagaagctgctaatgccccgattattgcgataactggttcaaatgcc
aaaagcactgtgacaacacttgtgggtgaaatggcaaagcaatgcggtttaaaagccgca
gttggaggtaatctagggacgcctgcattggagctgctaaacagcgatattgatgtttat
gtgatggagttgagcagttttcaattggaggccactgagcatttaaatgcaaaagtcgcg
acggttttgaacatcagtccagatcatcttgatcgttatgatagttatgagggctattat
caaaccaagtacaaaatatttaatggttgcgaaaaagcggttattaacctggatgataat
ttagcccaacctaaaacacttaattgccctgagcaaattggttttagtatagatggaaaa
ggtgctgattttgttttggatcgtacagctcaaccgtggcaattaattgtagaaggtgat
gccttgctgagtgttgatcagttaaaaattaaaggtttgcacaattacagcaacgcccta
gctgctttggcacttggtcatggatttggtttagatatggatggaatgttaaaagcgctg
aaatcttttccaggtttagatcatcgttgtcaatggattaagcaagttgatgaggttgat
ttttataatgattctaaagggacgaatgttggtgctacggaggctgccctcaaaggactc
ggaccagaatatgctaagcgtatcgtattgatgctaggtggtgttggtaaagatgcggac
tttaaagttctgcgcccagtcattgatcaatacgtttcgaaagtgatcgtttatggacag
gaccaagatattattgccaaggatttaagcggtgttgatttagacagagcagaaagtttc
gaacaagcattcgaaatggcatatcgtaacgctgatcataaaggtgccgtggttttctca
cctgcttgtgcgagcttcgacatgttttctggttttgaggctagaggtgaggcctttaaa
tcgatggtggaggcattatga
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