Bermanella marisrubri: HF888_13460
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Entry
HF888_13460 CDS
T06527
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00220
Arginine biosynthesis
bmar00240
Pyrimidine metabolism
bmar00250
Alanine, aspartate and glutamate metabolism
bmar01100
Metabolic pathways
bmar01110
Biosynthesis of secondary metabolites
bmar01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
HF888_13460 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
HF888_13460 (carB)
00220 Arginine biosynthesis
HF888_13460 (carB)
Enzymes [BR:
bmar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
HF888_13460 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
CoA_binding_2
ATP-grasp_2
GSH-S_ATP
DUF7626
Motif
Other DBs
NCBI-ProteinID:
QIZ85168
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Position
complement(2891867..2895088)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPKRTDIESILIIGAGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPSM
ADATYIEPITVEAVTKIIEQERPDVLLPTMGGQTALNCALGLEKAGVLEKYGVEMIGANA
DTIDKAEDRDRFDKAMKKIGLECPKASIAHTMEEAWEVQKDLGFPCIIRPSFTMGGSGGG
IAYNKEEFEEICTRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLSDKELQIMRNASLAVLREIGVETGGSNVQFGINPDNGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYTLDELQNDITGGRTPASFEPSIDYVVTKIP
RFTFEKFPQADARLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGACGFDPKVNLEDPEA
AREKVIAELNTPGAERIWYIGDAFRLGMTVEEIFSHCKVDPWFLVQIEDLIKEEAAVAES
ALTSLDEDRIFRLKRKGFSDERLAQLLSVSEKAFRKHRQKLGIRPVYKRVDTCAAEFATD
TAYMYSTYEEECEANPSEREKIIVLGGGPNRIGQGIEFDYCCVHAALASKEEGYEAIMVN
CNPETVSTDYDTSDRLYFEPLTLEDVLEIADKEKPKGVIVQYGGQTPLKLANELEAAGVP
IIGTSPEAIDRAEDRERFQQMIQRLGMKQPKNSTVTSEQEAIQKAAEIGYPLVVRPSYVL
GGRAMEIVNDETALVRYMTEAVKVSNDSPVLLDYFLNQAVEVDIDAVCDGEDVVIGAIMQ
HIEQAGIHSGDSACSLPPYSLPEDVQDEMRAQVAAMARELGVVGLMNTQLAYQDGEIYVI
EVNPRASRTVPFVSKCIGTSLAAIAAKVMTGKTLKELGFTEEIVPNYYSVKEAVFPFNKF
QGVDPILGPEMKSTGEVMGAGKTFGEAFLKAQMGAGEKLPTSGKVFVSVRDADKTGVIPV
AKGLEALGFELVSTSGTYKALSEAGVKVERVNKVNEGRPHIVDMIKNDEIAMTVNTTEGP
RAIADSAEIRRSALQHKVYYTTTLAGAEAVVKGLESGGLQSVARLQDLHAGMK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgcacggatatagaaagtattctgattatcggcgcgggcccaattgtaatc
ggccaagcctgtgagttcgattactctggcgcgcaagcctgtaaggcccttcgcgaagaa
ggttataaagttattttggtgaactctaacccagccaccattatgaccgatccatccatg
gccgatgctacatacatcgagccgattacggttgaagcggtcacgaagataatcgagcaa
gaacgtcccgacgtattgttgcctaccatgggtggtcaaactgcactgaactgtgcgctt
ggtttggaaaaagctggtgtgttagagaagtatggcgtggaaatgatcggcgccaatgcg
gacaccatcgacaaagcggaagatcgtgatcgctttgataaggccatgaagaaaattggt
cttgagtgtccaaaagcgtctatcgctcacactatggaagaagcctgggaagtacaaaaa
gacttaggtttcccttgtatcattcgtccgtctttcaccatgggtggtagcggcggtggt
atcgcttacaacaaagaagaatttgaagaaatctgtactcgtggtttggatctttcacca
accaatgaattgttaatcgatgagtcattaatcggttggaaagagtacgagatggaagtg
gttcgcgataagaatgacaactgcatcatcgtatgttctatcgaaaactttgaccctatg
ggtgtacacaccggtgactctattacagtggcgcctgctcaaaccctaagcgacaaagag
ctgcaaattatgcgtaatgcatcactagcagtattgcgcgaaatcggtgttgaaaccggt
ggttcaaatgttcagttcggtattaaccctgacaatggccgcatggtcgtcattgagatg
aaccctcgtgtaagtcgttcatctgcattagcatccaaagcaacaggtttcccaattgcg
aaaatcgcagcgaaattggcaatcggttatacgcttgatgaactgcaaaatgatattact
ggcggtcgtacaccagcatcatttgagccatcaatcgattatgttgtaactaaaatacct
cgctttacgtttgaaaagttcccgcaagcggacgcgcgtctaaccacacagatgaagtct
gtgggtgaagtgatggccattggtcggactcaacaagagtcattgcaaaaagcattgcgt
ggcctggaagtgggtgcgtgtggttttgatccaaaggtcaacttagaagatccagaagcc
gcccgtgaaaaagtgattgctgaattgaacacaccgggagccgagcgcatttggtatatt
ggtgatgccttccgtttaggcatgacagtggaagagatctttagtcactgcaaagtcgat
ccttggttcttggttcagattgaagatctgatcaaagaagaagccgccgtagcagaaagt
gctttgactagcttggatgaagatcgcatcttccgcctgaagcgcaaaggctttagtgat
gagcgcttagctcaattattgagtgtgagtgaaaaggcgttccgtaagcatcgtcagaag
ctgggtattcgtcctgtttataaacgcgttgatacctgtgcggctgaattcgctactgat
actgcgtacatgtattcaacgtacgaagaagagtgtgaagcgaacccaagcgagcgcgag
aaaattatcgtactgggtggtggtcctaaccgtatcggtcaaggtatcgagtttgattac
tgctgtgtacacgctgctctggcgtcaaaagaagaaggttacgaggccattatggtcaac
tgtaatccagaaaccgtttccactgactatgatacctctgaccgtttgtatttcgagcca
ttgacgcttgaagatgtattagagattgccgacaaagagaagccaaaaggcgttatcgtg
cagtatggtggtcaaacgccattaaaattggccaatgagctagaggcagctggtgtacct
attatcggtacgtctccagaagctattgaccgtgctgaagatcgtgagcgttttcagcaa
atgattcagcgcttaggtatgaaacaacctaagaactctactgtgacttctgagcaagaa
gcgattcaaaaagcggcagaaattggttatccattagtggtgcgtccttcttatgtgctg
ggcggtcgtgctatggagatcgtgaacgacgaaacggcgttagttcgctacatgaccgag
gcggttaaagtttctaacgattctcctgtattgttggattacttcttaaatcaagctgta
gaagtggacatcgatgcggtatgtgatggtgaggatgtggtcattggtgccattatgcag
cacatcgagcaagcgggtatccactccggtgactcggcttgttctttgccaccatatagc
ttgcctgaagacgtacaagatgaaatgcgtgcacaagtggcagccatggctcgtgaactg
ggtgtagttggcttaatgaatactcagttggcttaccaagacggtgaaatctatgtgatt
gaggtgaacccccgtgcatcacgtactgtgccgtttgtttctaagtgcattggtacttct
cttgccgccattgcagcaaaagtgatgacgggcaaaacactgaaagagcttggctttact
gaagagatcgtaccgaactactactcagtaaaagaagcggtgttcccattcaacaagttc
caaggtgtggatccaattctcggccctgagatgaaatccacaggtgaagtcatgggcgca
ggtaaaaccttcggcgaagccttcttgaaagcacaaatgggcgcaggtgagaaattgccg
acatctggtaaagtatttgtatcggttcgtgatgcagataaaacgggtgtgattcctgta
gctaaaggcctagaagcgctagggtttgagctggtctcaacctctggtacctacaaagcc
cttagcgaagcaggcgtcaaagttgaacgcgtgaacaaggtgaacgaaggtcgtccgcat
atcgtcgatatgatcaagaatgacgagatcgccatgaccgtgaacaccacagaaggccca
agggctatcgctgactcagctgaaattcgtcgtagtgcactacagcacaaggtgtactac
actacgacgctagcaggtgcagaggctgtagtgaaaggtcttgaatctggtggattgcag
agcgttgcacgtctacaggatttgcatgctggtatgaagtaa
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