Bermanella marisrubri: HF888_14390
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Entry
HF888_14390 CDS
T06527
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00550
Peptidoglycan biosynthesis
bmar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HF888_14390 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
bmar01003
]
HF888_14390 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
HF888_14390 (mrcB)
Enzymes [BR:
bmar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HF888_14390 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HF888_14390 (mrcB)
Glycosyltransferases [BR:
bmar01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HF888_14390 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bmar01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HF888_14390 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
QIZ85339
LinkDB
All DBs
Position
complement(3089142..3091445)
Genome browser
AA seq
767 aa
AA seq
DB search
MKKSATRSRFRTFLSWSFKLAIVGMVILGILLAYLDAQVRSKFEGKRWALPAKVYARPME
LYPGLDLKAKFLIQELEQVGYRRVPNIVAPGHYTMTGSGADVDVDIYRRFFPLFDGNEDA
ARVRLSIRGHQIKALWVDGAPADIARLEPLMIGGIYPKHNEDRELIQLEEVPQLLIDTLV
AVEDRDFYDHFGISLKGIARAMVVNIQRGGLVQGGSTLTQQLVKNFFLTRERSLKRKATE
ALMALLVELHYSKDEILEAYLNEVYLGQSGRRAIHGFGLASLHYFGKHISNLNAPEMAML
VGMVKGPSVYHPRYKTENAKARRNVVLTVMNEQGLISDYQALQWTNRDLNIVEYKQYQQV
EYPAYLDLVRRQLRQDYAEEDLTSEGLRIYTSLNPITQRQAEQALQKRLNRIEQDFRLET
ELQGAMVVASTQSGEIEALIGDRNPRYFGFNRALDAKRSIGSLAKPAVYLTALRSGPFNL
ISPIDDSEIAIAGAQGQIWEPQNYDKESHGVVPLYQAMAKSYNQATARLGMNVGLAKVKQ
TFADLGVEEGVPPYPSMLLGAFELAPIDVAQMYQTIAASGFKTPLKAIRGVTTADGQLLS
RYGYEVKQSIDSDSIYLIQRAMQQVVKMGTARYLNQIYDEQLGLAGKTGTSDSQRDSWFA
GFSGDTLGIVWVGSDDNRALPITGSSAALRVWANTFREIPLKPLMPIPTKNIVEKWVNIE
ENAVSEEGCDDVVQFPFIHNKMPPNISDCSNQKEQGTGWWSRFFGNE
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatcagcaactcgcagtcgttttagaacattcttatcttggagcttcaagtta
gccatcgtcggcatggttattttggggatattgcttgcctatcttgatgctcaagtacgc
agtaaatttgaaggcaaacgctgggcgttaccggctaaagtctatgcgcgtccgatggaa
ctatatccgggtttggatttaaaggcgaaattccttatccaagagctggagcaggttggc
taccgccgtgtgcctaatattgtcgcccctggccactacactatgacgggtagtggtgca
gatgtggatgtggatatctatcgtcgtttcttccctttgtttgacggcaatgaggatgcc
gcccgagtacggctaagtattcgtgggcaccaaataaaagctttatgggtggatggcgcg
cctgctgatattgcgcggcttgagccactaatgataggtggcatatatcccaaacataat
gaagatcgagagctcatccaacttgaagaggtgccacagctattgattgatactttggtt
gctgttgaggaccgagatttctacgatcattttggcattagtctaaaaggcattgcccga
gccatggttgtgaacatacagcgcggcgggctggttcagggtggctcaacattaacccag
caattggtgaaaaactttttcttaacccgtgagcgttcgcttaagcgtaaggctactgaa
gcattaatggccttgctagttgaattgcattacagcaaagacgaaattcttgaggcatat
cttaatgaagtatatctcgggcaaagtggacgtagagctattcatggttttggtttagcc
agtctacattactttggaaaacacatttccaatttgaatgcccctgagatggccatgctt
gtgggtatggtgaaaggtcctagtgtttatcacccaaggtataaaacggaaaacgccaaa
gcacgacgaaatgttgttttaaccgtgatgaatgaacagggattaatctccgactatcag
gctttgcagtggaccaaccgcgatttaaatatcgttgagtataaacagtatcaacaggtt
gaatatcccgcttatttggatttggttcgccgacaattgcgtcaggactatgccgaagag
gatttaaccagcgaaggtttgcggatctatacgagtttgaatcctatcactcagcgacaa
gctgagcaggcattgcaaaagcgcttgaaccggattgaacaagattttcgtcttgaaaca
gagttgcaaggagccatggtagtagcaagcacacaaagtggcgagattgaagctttgatt
ggtgatcgtaacccgcgttatttcggtttcaatagagcgttagatgcgaagcgctctatc
ggatctcttgctaagcctgcggtatatctaaccgcattgcgttccggtccgttcaatcta
atatccccgattgatgacagcgaaatcgctattgctggtgcccaaggacagatatgggag
ccgcaaaactatgataaagaaagtcatggtgtcgtgcccttatatcaagcaatggccaaa
tcttataatcaggccacagctcgtttgggtatgaatgtggggttggcaaaagtgaagcaa
acctttgctgatttaggtgtcgaagaaggtgtgccaccttatccctcaatgctgttgggt
gcctttgagttggcaccgattgacgttgcgcaaatgtatcaaaccatcgctgcgtctggt
tttaagacgccacttaaagctattcgaggcgtgacaacagcagatggacaattgctgtca
cgctacgggtatgaagtgaagcaaagtatcgatagtgattctatttatttgattcagcgt
gctatgcagcaagtggtgaaaatgggtaccgctcgatatctgaatcagatttacgatgag
caactgggtttagcgggtaaaaccggaaccagtgatagtcaaagggacagttggtttgct
ggattcagcggcgacaccttgggtattgtgtgggtgggcagtgacgataaccgagcttta
cctattaccgggtcatcggcagcgctacgggtttgggcgaatacgtttagagagatcccg
ttaaaacccttgatgccaattcctactaaaaatattgttgagaagtgggtgaatatcgaa
gaaaacgcagtgagtgaagaaggctgtgacgatgtcgtgcaatttccgtttatccacaat
aaaatgccacccaatatcagtgattgctctaaccaaaaagagcaaggcacggggtggtgg
tcacgtttttttggtaatgaataa
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