KEGG   Bermanella marisrubri: HF888_15450
Entry
HF888_15450       CDS       T06527                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
bmar  Bermanella marisrubri
Pathway
bmar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bmar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HF888_15450 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmar03400]
    HF888_15450 (uvrA)
DNA repair and recombination proteins [BR:bmar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HF888_15450 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HF888_15450 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 DnaJ_CXXCXGXG RsgA_GTPase AAA_23 nSTAND3 AAA_21 Viral_helicase1 NACHT cobW AAA_25
Other DBs
NCBI-ProteinID: QIZ85535
LinkDB
Position
3318103..3320931
AA seq 942 aa
MDTILVRGARTHNLKNIDLEIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVTEIYDYLRLLYARAGEPRC
PEHGEVLDAQTVSQMVDQILALPEGSKLMVLAPVVQDRKGEHLHLFEQLRGQGFVRVRVD
GIVVDMDDVPELDKNKKHTIEVVVDRIKVREGLEQRLAESLETALELTSGTAKVKGMDDD
KLELLFSSKFACPVCGYSITDLEPRMFSFNNPAGACETCDGLGVDQYFDPDKLIVDSSLT
LGEGAIRGWDRRTIYYFQMLSSVAEHFGFGMDKPFKKLTKKQRNVILYGSGQEDVPFHYV
NSRGDTVIKEHPFEGVIPNLSRRYHETESAMVREELSKLLSVQPCPTCNGSRLKEASRNV
FVDNHNIADITSMPIGPALDYFSKLNLKGKRGEIANKILKEINDRLHFLVNVGLNYLSLD
RSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLEHLRDLGNTV
LVVEHDEDAIRAADYLVDIGPGAGVHGGEVIFAGTPKQITKCKNSITGQYLSGKQKIEVP
TKRHEADPQKQLTITGASGNNLNDVTLNIPVGLLTCVTGVSGSGKSTLINQTLFPLAATE
LNRASTLKPSPYESIAGLDHFDKCVDIDQSPIGRTPRSNPATYTGIFTAVRDLFAGTEEA
RSRGYKAGRFSFNVKGGRCEACQGDGVIKVEMHFLADVYVPCDVCQGKRYNRETLEVRYK
GKNIHEVLDMTVEDACDFFEAIPALKRKLDTLMDVGLSYIRLGQNATTLSGGEAQRVKLA
RELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDHGNTVVVIEHNLDVIKTADWI
VDLGPEGGSGGGKIIAEGTPENLSKVKGSHTATFLKPMLAAK
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggatactatattggttcgtggggcgcgtacccataatctcaagaatatcgatttagaa
attccacgtgacaaattagtggtgatcacaggtttatcgggatccggtaaatcgtctctc
gcgttcgatacactttacgcagaggggcaacgtcgctatgtagaaagcctttctacctac
gctcgccagttcttgtccatgatggaaaagcccgacgtggaccatatcgaaggcctaagc
cctgccatttccattgaacaaaaatccaccagccacaaccctcgttcaactgttggtacc
gtgacggaaatctatgattacctgcgcctactatatgcccgagccggcgaacctcgctgc
cctgaacatggcgaagtgttagatgcacagaccgtcagccagatggtagatcaaattcta
gcattacctgagggcagcaaactcatggtgctggcacctgtggtgcaagatcgcaaaggt
gagcatttacatctattcgaacaactccgcggtcaaggttttgtgcgtgtacgcgtagac
ggcatcgttgtggacatggacgatgttccagagcttgataaaaacaaaaagcacaccatc
gaagtggtggttgatcgcattaaagtccgcgaaggactagagcagcgtcttgctgaatct
ttagaaacggctttggaactcactagcggtactgccaaagtgaaaggcatggacgatgac
aaacttgagctattgttcagttctaaatttgcttgccctgtgtgtggttacagcattacc
gatttagaaccacgtatgttctcctttaataaccccgcgggtgcttgtgaaacctgtgac
ggtttaggcgtagatcaatatttcgatccagacaaactgattgttgatagcagcttaacc
ctaggcgaaggtgccattcgtggttgggatcgacgcaccatttattacttccaaatgctg
agcagtgtggccgagcacttcggctttggtatggataagccatttaagaaactcacgaaa
aaacagagaaacgtgatcctttatggtagtggtcaagaagacgtaccgtttcactatgtt
aatagccgaggcgatacggttataaaagaacatccatttgaaggtgtcattcctaatctt
tcgcgtcgctatcatgaaaccgaaagtgctatggtgcgtgaagaactatccaagttgctt
tccgtacaaccttgccccacttgtaatggctctcgtctaaaagaagccagtcgtaatgtg
tttgtggataaccacaatattgcggacatcacctcaatgcctatcggtcccgctttagat
tatttttctaagctaaatctaaagggcaagcgtggcgaaatcgctaataaaatcctaaaa
gaaattaacgaccgcctgcactttctagtgaacgtgggtctgaactatctcagcctggat
cgcagtgcagatacactttctggtggagaggcgcagcgtattcgcttagccagtcaaatt
ggcgctggacttgtgggcgtcatgtacattctggatgaaccttccatcggtttgcaccag
cgcgacaatgatcgactactgaaaacattagagcacttgcgcgacttgggcaacacagta
ttagttgttgaacatgatgaagacgctattcgtgccgccgactaccttgtggacataggg
ccaggggctggggttcatggtggcgaagtgatttttgctggcacgcctaagcaaatcact
aaatgcaaaaattcgattactggccaatacttaagcggcaaacaaaaaatcgaagttccg
acaaaacgccatgaagcggatccccaaaagcaactgacgatcacaggtgcatccggtaat
aacttaaacgacgtgacactgaacattccggttggcttgttaacctgtgtaacaggtgta
tcaggtagtggtaaatcaaccttgattaaccaaactctattcccactggcagcaactgaa
ttgaatcgcgcttccactttgaagccttctccgtatgaaagcattgcaggcttggatcat
tttgataagtgcgtagacatagatcaaagccctattggacgcaccccaagatctaaccct
gcaacatacacaggtatctttaccgccgtgcgcgatttatttgctggaactgaagaagct
cgaagccgtggctataaagccggtcgctttagctttaacgtgaaaggcggtcgctgcgag
gcgtgtcagggtgacggtgtaattaaagtcgaaatgcatttccttgcggatgtgtatgtg
ccttgcgatgtttgccaaggcaagcgctataaccgtgaaacgttggaagtgcgttataag
ggcaaaaatattcacgaagtattggatatgacagtggaagatgcttgtgacttttttgaa
gctattcctgcacttaagcgaaaactcgacacgttaatggacgtcggcttaagttatatt
cgcttgggccaaaacgccacaacactttccggcggcgaagcacagcgagtaaaacttgct
cgggaattaagtaaacgcgatacaggtaaaaccctttatattcttgatgaacccacaacc
ggtttgcacttccatgatattcagcaactattaactgtattacatcgtctgcgcgatcac
ggtaataccgtggttgtgattgaacataatttagatgtaataaaaaccgctgactggatt
gttgaccttggccctgaaggtggctctggcggtggtaaaatcattgcggaaggcacacct
gaaaacctgagtaaggtaaaaggcagccatacggctacattcttgaaacccatgctggca
gcgaagtaa

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