Bermanella marisrubri: HF888_16010
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Entry
HF888_16010 CDS
T06527
Name
(GenBank) response regulator
KO
K06596
chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Organism
bmar
Bermanella marisrubri
Pathway
bmar02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF888_16010
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bmar01001
]
HF888_16010
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
bmar02022
]
HF888_16010
02035 Bacterial motility proteins [BR:
bmar02035
]
HF888_16010
Protein kinases [BR:
bmar01001
]
Histidine kinases
CheA family [OT]
HF888_16010
Two-component system [BR:
bmar02022
]
CheA family
ChpA-ChpB/PilGH (chemosensory)
HF888_16010
Bacterial motility proteins [BR:
bmar02035
]
Pilus system
Twitching motility proteins
HF888_16010
Chemosensory pili system proteins
HF888_16010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hpt
Response_reg
CheW
HATPase_c
H-kinase_dim
VpsR
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QIZ85643
LinkDB
All DBs
Position
complement(3445885..3452310)
Genome browser
AA seq
2141 aa
AA seq
DB search
MGDRHDYVALDWVKGEIEEVLKQAQYELEAYVEAPDDTARMKFCLTYLHQVRGTLQMVEF
YGAAMLAEEMEAVAQALLSDQVADANEARQVLMQAILQLPNYLDHIKLGRRDLPVVLLPV
LNDLRGARGEALLSETSLFQPSIETRQPLTDAQERQFSDKQFVDLLRKLRQMYQVALLGL
LKGKDVDQNTQYLHKVAARLAKLFQKSQAQDLWHAAAAVLEGVASNGIALNSAVKELLKK
LEPELKKVVTQGPSSLNARNDELLKNLLFYVAKCDINTPRIEQIKQDFNLKDALPTQDEV
TAERKALKGPDKATMGSVATALIEEITTLKERLDLLVQDKEATSEQLALLIPAFKQITDT
MGMLGLGTPRKVIQDQFDFISQFVAEGQTASNVQLMDVAGALLYVEASLTGLSDRFGGEP
ATAEAQQLGEAQHVVLRESKQIIEKVKELVVEYAKGGELSLLADAADQLMNLRGTLIMVP
QVDAADIARYCSNILHKHVNQNERPSAALLEVLAESLSGVEYFLERVDDDAQQDSNGILL
RAKEVILPYIPAQDLSPDEPVVAQDALEDDLEEVSLEVSSDDGLETDSQTRLQAADSAYE
ASEDSEAALETITLDDVSIQETEPEVIDFASIEQPEEWDVSAEDALTAALEEQPDNEFVT
VEPEQVAVEQLAPVAMEDDDDDLIDDEIIEIFLEEAEEVLETIHEFWPAYKGDTSDEEAL
ITTRRAFHTLKGSGRMVSASDIGETAWAIENMFNRLIDQTIQLSDELFTIVDYVIEQLPS
LIEAFKHRHVCPLDVEAIQEYANKIAKGEVAGEWHGAAKKFEQDSQNLATTVESSAKLES
HDGISETETNDQNMDQALLSVFSSEVTSHLKVVAEFIETAQSEDYQIDLNDDLQRALHTL
KGSAHMAHIEPIAEVAAGLENFTKDLRAYHIEPSAEIIHFYIRGKELLDQGYQQLDSTPY
AEIPGSQDLNADLIRFVDQVRTDVAEDSGQKNKGQVDPQVLSIFLSEGMDIINEAEDLMD
DWKAHPDNSELLLTLIDEMQTLEKGAQMSELPPLVALCQALQIAYQRIKDEALAADSELA
KTIIDAHEALLNMMDMVAASQAIVPAKQLIADLTGEVPVDSEEEYKQLVPDNSDLDDGPV
TLDIPQVEVREEVIQQDIDPELLEIFLEEAEELLDSISEALNDWKQDPLNLIKVAELQRD
LHTFKGGARMAEINAIGDLAHELEDLYEGLSLGRLTATPQLFELLQICHDRLADMVAALQ
DNQGMRPAPELITAIQLFIAGESLEVPSQANAIDETSTASDEDSLADPSASAVKPLQETQ
SVTVESLAIDADEEVIEIFLEEADELLEELDGLLQQWQQSPENLSTNEAVQRVLHTLKGG
ARIAGLVDIGDMAHHMETELQKRLTEKRPGDEALFNSLHEQYDFIAGRIEHVQEWFNAGA
SEPLMVQVENAVQSNENTDSDRAEVLSQPQTNVVPLRPQPDAEENTSKTTTAPIVPQAEN
NQVVAQSSPQQPVSRTEQEAQGKRQGPQEMIKVPASLLDGLVNLAGETSISRGRLETQVT
DFSYTLDEMDATLDRLRDQLRRLDMETEAQVLFRREQQGPEYEDFDPLEMDRYSQLQQLS
RSLVESASDLADLKSTLLDKTRDAETLLLQQSRVNTELQEGLMKTRMVPFSRLVPRLRRI
VRQISTELGKQVELHVSNAEGEMDRSVLERLISPLEHMLRNAVDHGLESTEQRKAAGKSE
TGNIYLSLSRDGGDVVLRLADDGAGINVDAVRRKAIDRGLIDPSVKMPDQEIYQFILQAG
FSTAEQVTQISGRGVGMDVVNSEIKQVGGTVVINSQQNQGTEFVIRLPFTVSVNRALMAK
VGDALFAIPLNNIEGIVRVSANNLRELLKQDKPTYHYAGREYQLEYLGRLLRDENMTRLP
EDNTPMPVVLVRGSSPAAIQVDTLMGSREIVVKTLGPQFNSVVGVSGGTILGDGSVVIIL
DLPNMMRHVNTLEYQQHMAIEHEQEAELEAVELARQSDVTSILVVDDSVTVRKVTTRLLE
RNGMEVRTAKDGVDAMATLQEYKPDLVLLDIEMPRMDGFEVASQMRHSQALKEIPIIMIT
SRTGEKHKERAMAIGVTDYMGKPFQEDRLLEAIAEYTGHRG
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcgccacgattacgttgcccttgattgggtcaaaggcgaaatagaagaagtc
ttaaaacaagctcagtatgaactggaggcttatgtagaagcaccagacgataccgcgcgc
atgaaattctgtctgacgtatttacaccaagtacgtggtacgttgcagatggtcgaattc
tatggtgcagctatgctggccgaagagatggaggctgttgcgcaagctttgttgagtgat
caagtcgctgacgccaatgaggctcgtcaggtcttgatgcaagcaattttacaattaccg
aattatcttgatcacataaaactcgggcgtcgcgaccttcctgttgttctactccctgtt
ctcaatgatttgcgtggtgctcgcggcgaagcgttactatcagaaacgtctttattccaa
ccctcaatagaaacccgccaaccgcttacggatgcacaagaacgtcagttttctgataaa
caatttgtcgatcttttgcgtaagcttcgacagatgtatcaggtagccttactaggttta
ttgaaaggcaaagatgtcgatcaaaatacgcagtacttgcataaagtagctgcgcgatta
gctaaactttttcaaaaaagccaagcacaagacttatggcacgctgcggcagcggtgctt
gaaggtgtcgcaagtaatggtattgcgttaaacagtgctgttaaagaactgttgaaaaag
cttgagccagagttgaaaaaagtggttactcaaggtcctagctcgttgaatgcgcgcaat
gacgagttgctcaagaacttacttttttatgtggcgaaatgcgatatcaatacacctcgt
attgagcaaattaagcaagactttaatcttaaggacgcgttacccacacaagacgaggtg
acagcagaacgcaaagcacttaaaggtccagataaagcaaccatgggtagcgttgcgact
gccttgattgaagaaattacaacgctcaaagagcgattggatctattagttcaagacaaa
gaagcgacctcagagcagcttgcacttttgattcctgctttcaagcaaatcaccgatacc
atggggatgctgggtctcggcacgccacgaaaagtgatacaggatcagtttgacttcatt
agtcagtttgttgcagaaggccaaacggctagcaatgttcaattgatggatgtggccggt
gcgttgctgtatgtggaggcatcgctcaccggattaagtgatcgctttggcggtgaacct
gcaacggcagaagcccagcagttgggtgaagctcagcacgttgtattgcgcgaatcgaag
caaatcattgaaaaagtgaaagagctggttgtggagtatgcaaagggtggagagttatca
ctgcttgcggatgccgccgatcagttgatgaatttacgtggcaccttgattatggtccca
caggtggatgcggcagatattgcacgttactgctccaatatcttgcataaacatgttaat
caaaatgaacgcccatcagccgcgttattagaagttttggctgaatcattaagtggtgtt
gaatatttcttagagcgtgttgatgacgatgcgcaacaagatagcaatggtattttgctg
cgtgcgaaagaagtcattttgccatacatacctgcgcaggatttatcccctgatgaaccg
gttgtagcacaagatgcattagaagatgacctcgaagaagtctcattagaagtgtctagt
gatgatgggctagaaacagattcgcaaacaaggttacaagctgctgatagtgcatatgaa
gcttcagaggatagcgaagcagcattagaaacgattacgttggacgatgtttccatacaa
gaaaccgaacctgaggttatcgattttgcttccatagaacagcctgaagaatgggatgtc
agtgcagaagatgcattaactgcggcattggaagaacaaccagacaatgaatttgtcacg
gtagaaccagaacaagtagccgttgagcaactagcacctgttgcaatggaagatgacgat
gatgatttgattgacgatgagattatcgaaattttcctagaggaagctgaagaagtatta
gaaaccattcatgaattttggccagcctacaaaggcgatacatcagatgaagaagctctg
atcacaactcgtcgagctttccatactttgaaaggcagtgggcgaatggtcagtgccagt
gatattggcgagactgcttgggcgattgaaaacatgttcaatcgtctcattgaccaaacc
attcaattaagtgatgaactattcacgattgttgattacgtgattgagcaattgccaagt
ctcattgaagcgtttaagcatcgccatgtatgtccattggatgtagaagcgattcaagaa
tacgccaacaaaattgccaaaggtgaagttgctggagaatggcatggagcggcaaaaaag
tttgagcaagattcgcaaaatttagccaccacagtcgaatcctctgcaaagttagagagt
catgacgggatttcagagacagaaaccaatgaccaaaacatggaccaagcattgctaagt
gtatttagcagtgaggtaaccagccacttaaaagtggtggcagaatttattgaaactgca
cagagtgaagattatcaaatagacttgaacgatgatctacagcgagcgttacacactttg
aaaggtagtgcgcatatggcgcatatcgaaccgatagcagaagtggcagcgggtttagaa
aactttacaaaagacctaagggcttatcacattgagcctagtgcagaaatcatacatttc
tatatccgaggtaaggaattactggatcaaggctatcagcaactggattcaacgccctat
gcggagatccccggcagtcaagatctaaatgcggacctgatccgttttgtcgatcaagta
cgcaccgatgtggcggaagactctggtcagaagaacaaaggtcaagttgatcctcaagtg
ctgtccatcttcttgtccgagggcatggacattattaatgaagcggaagacttaatggat
gattggaaagctcatccagataattccgaattgttgctgaccctcattgatgaaatgcaa
accctagaaaagggtgctcagatgtctgagcttcctcctttagtcgctttgtgtcaggca
ttgcaaatagcctatcagcgcatcaaggatgaagctttggcggccgatagtgaacttgct
aaaaccattattgatgctcatgaagctctactgaatatgatggatatggtggctgcaagc
caagccatcgtgcctgcaaaacaactgatcgcagatctcactggtgaggtccctgtcgat
tctgaagaagaatacaagcaattagtcccagacaattctgatttggatgatggtcctgtg
actttggatattccacaggtggaagtgagggaagaagttattcagcaggatattgatcca
gagttattagagatctttttagaagaagcggaagaacttttagactccatctctgaagcc
ctgaatgactggaaacaagatccattaaatttaattaaagttgctgaattgcagcgtgac
ttgcatacctttaagggcggcgcgcgtatggcagaaattaatgccattggcgacttagcg
catgagttagaagacttgtatgaagggctcagtctcggacgcttaaccgcaacccctcag
ttatttgagttactccaaatttgtcatgatcgtttggctgatatggtcgcagccttgcaa
gataatcaaggcatgcgcccagctccagaactgattactgccattcaactatttattgct
ggtgagtcgctggaagtaccatcgcaagctaacgcgattgatgagacatcaactgcaagt
gatgaagatagtttggctgatccttctgcatctgcagtgaaaccattgcaggagactcag
tcagtcacagttgagagtctggcaatagacgcagatgaggaagtaatcgagatcttcctt
gaagaagccgacgaattgctagaagaattggatggtttattgcagcagtggcaacaatca
cctgaaaatctaagcacgaacgaagctgtgcagcgtgttttgcatacgctgaaaggcggt
gcacgcatagctggtttagtcgatattggtgacatggcgcaccatatggagactgaattg
caaaaacgtctcacggaaaaacgtcctggtgatgaagccttgttcaacagtctacatgaa
caatatgatttcatagcgggtcgtattgaacatgtacaagagtggtttaatgcaggtgct
tcagagccacttatggttcaggtcgagaatgctgttcagagcaacgagaataccgatagc
gatcgagccgaagtgctatctcagccgcaaaccaatgttgtgccattgcgaccacaaccc
gacgccgaggagaatacgtcgaaaacgacgactgcgccaattgtacctcaggccgagaat
aatcaagtagttgctcagtcttcaccgcagcaaccggttagtcgaaccgagcaagaggct
caaggcaaacgtcaaggcccgcaggaaatgatcaaggtacctgcttctttgcttgatggt
ttggttaacttggcaggtgaaacatcgatcagtcgtggtcgtttagagactcaagttaca
gatttctcttacacattggatgaaatggacgccaccttggatcgcttgcgcgaccagctt
cgacgtttagatatggaaaccgaggctcaggtgcttttccgtcgtgaacaacaaggtcca
gaatatgaagattttgacccattggagatggaccgctatagccagttgcagcaactgtct
aggtcactagtagagtcggcatcggacttagcggatttaaaatcgacacttttggataag
acccgtgatgcagaaacattattgcttcagcaatcgcgcgtaaataccgaattgcaagaa
ggtctaatgaagactcgaatggtaccgtttagtcgtttggtaccgcgtctacgtcgtatc
gtgcgtcaaatcagtacagaattgggcaaacaggtcgagttgcatgtcagtaatgctgaa
ggcgaaatggaccgtagcgtactagagcgtctgatttctcctctagagcacatgctacgt
aacgctgtagaccatggcttggaatcgactgaacagcgtaaagctgcaggtaaatcagaa
accggtaatatttatttaagcctttcccgtgatggcggtgacgtagtactgcgtttagcc
gatgatggtgcaggtattaatgttgatgcagtgcgtcgcaaagcgattgatcgtggattg
attgatccaagtgtgaaaatgccggatcaagaaatctatcagtttatccttcaagcgggt
ttcagtacggctgaacaagtgacacagatctccggccgtggcgtaggcatggacgttgtg
aatagtgagatcaaacaagtaggcggcacggttgtgattaattcacaacagaatcaaggc
actgagttcgtcattcgattgccgtttacagtatcggtaaaccgagcacttatggcgaaa
gtcggtgacgctttgttcgcaataccacttaacaatattgaaggtattgtgcgcgtgagt
gccaacaacttgcgtgagctactcaaacaggataagccgacttatcactatgcaggtcgt
gaataccagttagagtatttaggtcgcctattgcgcgatgaaaacatgacgcgcctgccc
gaagacaatacgccgatgcctgtcgtgcttgtgcgtggttcttcgcctgctgcgattcaa
gtggatacattgatgggttcacgggaaattgttgtaaaaaccttagggccacagtttaac
tctgtagtgggtgtatcgggtggtaccatcttgggtgacggtagcgtagtgatcatcttg
gatctaccgaacatgatgcgtcatgtgaatactcttgaatatcaacagcacatggctatt
gaacacgagcaggaagccgaactggaagcggttgagctggctcgtcaaagcgatgtgaca
tcaatactggttgtggatgactccgtaaccgtacgtaaagtgacgacccgtcttctagag
cgaaatggcatggaagttcgtacggcgaaagatggtgtagatgccatggcaactctgcag
gagtacaagccggacttagtgttgttggatatagaaatgccgcgtatggatggtttcgag
gtagcttcgcaaatgcgtcatagccaggcattgaaagagattccgattattatgatcacg
tcgcgtaccggtgaaaaacacaaggaacgggctatggctattggcgtgacagactacatg
ggtaagccattccaagaggatcgacttttggaagctattgctgaatacacagggcatcgt
gggtga
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integrated database retrieval system
