Blautia massiliensis: LK422_04140
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Entry
LK422_04140 CDS
T08787
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmas
Blautia massiliensis
Pathway
bmas03420
Nucleotide excision repair
bmas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LK422_04140
03430 Mismatch repair
LK422_04140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmas03400
]
LK422_04140
Enzymes [BR:
bmas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LK422_04140
DNA repair and recombination proteins [BR:
bmas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK422_04140
MMR (mismatch excision repair)
Other MMR factors
LK422_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
DEAD
AAA_30
SLFN-g3_helicase
NACHT
ResIII
AAA_22
PhoH
nSTAND3
AAA_16
FliD_C
SMC_N
AAA_11
UvrD_C
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
UEA29589
LinkDB
All DBs
Position
841284..843419
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AA seq
711 aa
AA seq
DB search
MAAVKNGREYLAHVTGTLRHRITQLDDSIEAGQKEIEGMHEYYWENYTEMDQYGYENFDN
QQALLHEINASNEKIELRRRFRKMMDSPFFGRVDFCYEGDDEPEIFYIGIANLAEENGGL
PLIYDWRAPVSGLFYDFDKGPASYQAPLGEIHGDIAAKWQYKIRGGKMIYEFESDVKIDD
EILKAELGSNGDVQLKNIIRTIQKEQNAIIRNTSDRIMVIQGAAGSGKTSIALHRIAYLL
YHDRKNLKSSSVLVLSPNGVFSDYISHILPELGEENIREMSFDLFAYKRLKNTVSDCEDR
YDLIERQISGLCDEELLKEKQSRDFLDRMEGYLAELEDSLMNFRDIEHRGVVKKEQEIIE
LFYFKFMDIPLLSRMDAVAEYFIDEVETLKGFDLPDEERDAVKSRFYRMYETRDLYVLYN
RFLRQEGFPALPQVQYEKRKLRYEDVYPVLYLKYRLETQQEDSGVRHLIVDEMQDYSMIQ
YLIIQRLFKCKMTILGDREQTMDGDQQDVLTFLPKIFGKDIRRIVMNKSYRNTIEIASYA
NKLAGITEVELFERHGKPVEEKEFTGLTEALERVVKELRLEKQTVAEADEDMPENAASET
DGTETGEELSYETAAVITRTADEAREAYYILQKKLEAEGFDTKERLSLLHRDSTNFKKGL
TVTTFYMAKGLEFDQVFSVFPGTDRSPIVQRARYIAATRALHELYMYEITE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagtaaaaaacggacgggaatatcttgcacatgtaacaggaactctgcgtcac
cggatcacacagctggatgattccatagaggccggtcagaaagaaatcgaaggaatgcac
gagtattactgggaaaactacacagagatggaccagtatggctacgaaaattttgataac
cagcaggcacttctccatgagatcaatgccagcaatgaaaagatcgagctgcgccgcaga
ttccgtaagatgatggattcaccattctttggcagagtggatttctgctatgagggtgat
gatgagccggagatcttttatataggtatcgcaaaccttgcggaggaaaacggtggtctg
cctctgatctatgactggagggcaccggtgtccggattgttctatgattttgacaaagga
ccggcctcctatcaggccccgctgggtgagatccatggagatattgcggcaaagtggcag
tataagatccgtggcggaaaaatgatctacgagttcgagagcgatgtgaaaattgatgat
gagatcctgaaggcagagcttggaagcaacggagatgtacagctgaaaaacattatccga
accattcagaaggagcagaatgctattatccgaaacacctcggacaggatcatggtgatt
cagggggctgcaggaagcggaaagacttccattgctctgcacaggatcgcatatctcctt
tatcatgacagaaagaatctgaaatcctcttctgtgctggtactttcgcccaatggagta
ttttcggattatatttcccatatcctgccggagcttggtgaggagaacatccgggagatg
agctttgatctttttgcctataagagactgaaaaatacagtgtctgactgcgaggatcgt
tatgatctgatcgagcggcagatctcaggcttatgtgatgaggagcttctgaaggaaaaa
cagtcccgggattttctggaccgtatggaagggtatctggcagaactggaagacagtctt
atgaatttcagggatatagaacatcgtggcgtagtaaaaaaagaacaggaaattattgaa
ctgttttattttaaattcatggatatcccgctgctttccagaatggatgcagtggcagag
tatttcattgatgaggtggaaacgttgaagggctttgaccttccggatgaagaaagggat
gctgtgaagagtcgtttttaccggatgtatgagacaagagatctttatgtgttatacaat
cgtttcctgaggcaggagggatttccggcgcttccacaggtacagtacgaaaaaagaaag
cttcgttatgaggatgtgtatccggttctgtatctgaaataccgtctggagacccagcag
gaagacagcggtgtccgccatctgatcgtggatgagatgcaggattattccatgatccag
tatctcatcatccagaggctttttaaatgcaaaatgacgatcctgggagatcgggagcag
accatggatggggaccagcaggatgtgcttacattccttccgaagatctttggcaaggat
atcagaaggatcgtgatgaataagagttaccgtaataccattgagattgcttcctatgcg
aataagcttgcggggatcacagaggtggagctttttgaacgccatggaaaaccggtggaa
gagaaagaatttacggggcttactgaggcactggagcgtgtggtaaaggaactgagactg
gagaagcagacagtggcggaagccgacgaagacatgccggaaaatgcggcttcggagaca
gatgggactgagaccggggaggagctttcttacgagacagcagcggtgatcaccagaact
gcagatgaagcgagagaggcatattatattcttcagaaaaaactggaagcagagggcttt
gacacaaaggaaaggctgtcactgcttcacagggacagcacaaatttcaaaaagggtctt
actgttaccacgttttatatggcaaagggactggaatttgatcaggtattttctgtattt
ccggggactgacagaagtccgatcgtgcagagagctagatatattgcggcaaccagggcg
ctgcatgaattgtatatgtatgaaataacagaataa
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